RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 CCNYQ8ND76 341 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 CNKSR1Q969H4 720 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 STK32BQ9NY57 414 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 TLK1Q9UKI8 766 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 CEP170BQ9Y4F5 1589 aaPredicted RBP13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 PITPNM2Q9BZ72 1349 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 SASH3O75995 380 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 LDHAP00338 332 aaKnown RBP13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 HSD17B3P37058 310 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 STX1BP61266 288 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 GABPAQ06546 454 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 PDIA2Q13087 525 aaKnown RBP13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 JAMLQ86YT9 394 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 ZBED8Q8IZ13 594 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 KLC2Q9H0B6 622 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 PLEKHG2Q9H7P9 1386 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 POLD1P28340 1107 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 TBX2Q13207 712 aaPredicted RBP13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 TAF12Q16514 161 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 FIGNQ5HY92 759 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 C1orf146Q5VVC0 180 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 JADE1Q6IE81 842 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 TMEM270Q6UE05 265 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 DNAAF3Q8N9W5 541 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 C3orf20Q8ND61 904 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 CASKIN2Q8WXE0 1202 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 CAPN6Q9Y6Q1 641 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 DUSP10Q9Y6W6 482 aa13.03□□□□□ -0.32
NPC1L1-204ENST00000546276 TLR3O15455 904 aaKnown RBP13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 DIAPH2O60879 1101 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 KRT3P12035 628 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 TROAPQ12815 778 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 ART3Q13508 389 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 ATP11CQ8NB49 1132 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 ATL2Q8NHH9 583 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 PIP4K2CQ8TBX8 421 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 MYCBPAPQ8TBZ2 947 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 ZNF526Q8TF50 670 aaPredicted RBP13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 ARL8AQ96BM9 186 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 LACRTQ9GZZ8 138 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 SUCLA2Q9P2R7 463 aaPredicted RBP13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 APEX2Q9UBZ4 518 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 APOBEC2Q9Y235 224 aaKnown RBP13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 RASSF10A6NK89 507 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 CDH16O75309 829 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 SLC9A1P19634 815 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 HIPK4Q8NE63 616 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 HSPH1Q92598 858 aa13.02□□□□□ -0.32
NPC1L1-204ENST00000546276 CFAP69A5D8W1 941 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 SLC26A4O43511 780 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 IFRD2Q12894 506 aaPredicted RBP13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 TFDP2Q14188 446 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 HP1BP3Q5SSJ5 553 aaPredicted RBP13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 KRT80Q6KB66 452 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 ENOSF1Q7L5Y1 443 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 ILDR1Q86SU0 546 aaPredicted RBP13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 FAM149B1Q96BN6 582 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 ERP44Q9BS26 406 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 PAGR1Q9BTK6 254 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 CFLARO15519 480 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 CCDC117Q8IWD4 279 aaPredicted RBP13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 MCPH1Q8NEM0 835 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 SDCCAG3Q96C92 435 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 HDAC11Q96DB2 347 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 FAM96AQ9H5X1 160 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 SLC38A10Q9HBR0 1119 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 IP6K2Q9UHH9 426 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 DBR1Q9UK59 544 aaKnown RBP13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 SUFUQ9UMX1 484 aa13.02□□□□□ -0.33
NPC1L1-204ENST00000546276 DEPDC5O75140 1603 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 SH3BP5O60239 455 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 HNRNPCL1O60812 293 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 TMEM253P0C7T8 217 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 AKR1B1P15121 316 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 ITIH2P19823 946 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 FMO5P49326 533 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 LONRF1Q17RB8 773 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 ARHGAP27Q6ZUM4 889 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 PDZD8Q8NEN9 1154 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 SGSM3Q96HU1 749 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 FAM161BQ96MY7 647 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 DRC3Q9H069 523 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 TRABDQ9H4I3 376 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 ZNF446Q9NWS9 450 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 G3BP2Q9UN86 482 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 EIF4E1BA6NMX2 242 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 LPXNO60711 386 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 P4HBP07237 508 aaKnown RBP13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 SRGAP2BP0DMP2 458 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 CCND1P24385 295 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 AP2B1P63010 937 aa13.01□□□□□ -0.33
NPC1L1-204ENST00000546276 NTRK3Q16288 839 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms