RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 UNC45AQ9H3U1 944 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 ALG13Q9NP73 1137 aaKnown RBP10.53□□□□□ -0.72
TRAF1-203ENST00000546084 PPP1R9AQ9ULJ8 1098 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 MYH13Q9UKX3 1938 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 MYO3BQ8WXR4 1341 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 MEIS2O14770 477 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 HSD17B3P37058 310 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 MARCKSL1P49006 195 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 PDE6CP51160 858 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 STRN3Q13033 797 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 BAATQ14032 418 aaPredicted RBP10.53□□□□□ -0.72
TRAF1-203ENST00000546084 NAB2Q15742 525 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 GKAP1Q5VSY0 366 aaPredicted RBP10.53□□□□□ -0.72
TRAF1-203ENST00000546084 SPOPLQ6IQ16 392 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 KCNV1Q6PIU1 500 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 HOOK3Q86VS8 718 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 DEPTORQ8TB45 409 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 C18orf8Q96DM3 657 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 NAP1L4Q99733 375 aaKnown RBP10.53□□□□□ -0.72
TRAF1-203ENST00000546084 AZI2Q9H6S1 392 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 KCNH7Q9NS40 1196 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 FAM107AO95990 144 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 EZRP15311 586 aaKnown RBP10.53□□□□□ -0.72
TRAF1-203ENST00000546084 RPA1P27694 616 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 GBP2P32456 591 aaPredicted RBP10.53□□□□□ -0.72
TRAF1-203ENST00000546084 NUMBP49757 651 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 VAMP7P51809 220 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 Q3C1V9 767 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 TMEM270Q6UE05 265 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 SYCE1Q8N0S2 351 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 USP38Q8NB14 1042 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 ARHGEF26Q96DR7 871 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 C9orf72Q96LT7 481 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 APOL6Q9BWW8 343 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 CNOT8Q9UFF9 292 aaKnown RBP10.53□□□□□ -0.72
TRAF1-203ENST00000546084 USP54Q70EL1 1684 aa10.52□□□□□ -0.72
TRAF1-203ENST00000546084 TTC36A6NLP5 189 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 CHUKO15111 745 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 THAP12O43422 761 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 SGPL1O95470 568 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 FLT3P36888 993 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 CETN2P41208 172 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 PIK3CAP42336 1068 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 MFSD4BQ5TF39 518 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 SNRNP48Q6IEG0 339 aaKnown RBP10.52□□□□□ -0.73
TRAF1-203ENST00000546084 PPP1R21Q6ZMI0 780 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 TRIM59Q8IWR1 403 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 SULF1Q8IWU6 871 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 IL31RAQ8NI17 732 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 NLRP4Q96MN2 994 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 PWWP2AQ96N64 755 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 NUP85Q9BW27 656 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 SAMD15Q9P1V8 674 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 NR2E1Q9Y466 385 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.52□□□□□ -0.73
TRAF1-203ENST00000546084 INO80B-WBP1J3KQ70 363 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 NOP56O00567 594 aaKnown RBP10.52□□□□□ -0.73
TRAF1-203ENST00000546084 IL1R1P14778 569 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 HNRNPH3P31942 346 aaKnown RBP10.52□□□□□ -0.73
TRAF1-203ENST00000546084 USP11P51784 963 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 ERVK-9P63128 1117 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 RNF207Q6ZRF8 634 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 PROM2Q8N271 834 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 DAGLBQ8NCG7 672 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 RUBCNQ92622 972 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 CEP63Q96MT8 703 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 NT5C1BQ96P26 610 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 WRNIP1Q96S55 665 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 INO80BQ9C086 356 aaPredicted RBP10.52□□□□□ -0.73
TRAF1-203ENST00000546084 DNAJC18Q9H819 358 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 GDF3Q9NR23 364 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 C1orf112Q9NSG2 853 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 HAUS2Q9NVX0 235 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 ODF2LQ9ULJ1 636 aa10.52□□□□□ -0.73
TRAF1-203ENST00000546084 SOX5P35711 763 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 TRPC3Q13507 836 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 SNCBQ16143 134 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 CDO1Q16878 200 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 LONRF1Q17RB8 773 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 NBPF20Q3BBV1 942 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 GADL1Q6ZQY3 521 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 INTS9Q9NV88 658 aaKnown RBP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 PCSK1NQ9UHG2 260 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 AJAP1Q9UKB5 411 aaPredicted RBP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 SH3BP1Q9Y3L3 701 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 ALG6Q9Y672 507 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 MYH7P12883 1935 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 EYA4O95677 639 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 FGRP09769 529 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 LMNB1P20700 586 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 NSFP46459 744 aaKnown RBP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 PSEN1P49768 467 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 RPS6P62753 249 aaKnown RBP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 PPATQ06203 517 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 TTLL6Q8N841 843 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 XXYLT1Q8NBI6 393 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 DCAF4Q8WV16 495 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 KRT35Q92764 455 aa10.51□□□□□ -0.73
TRAF1-203ENST00000546084 N4BP2L2Q92802 583 aaPredicted RBP10.51□□□□□ -0.73
TRAF1-203ENST00000546084 ZWILCHQ9H900 591 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms