RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 CNTNAP2Q9UHC6 1331 aa18.7■□□□□ 0.58
CPSF7-225ENST00000545934 DDX11L8A8MPP1 907 aa18.69■□□□□ 0.58
CPSF7-225ENST00000545934 PAPLNO95428 1278 aa18.69■□□□□ 0.58
CPSF7-225ENST00000545934 HOXA11P31270 313 aaPredicted RBP18.69■□□□□ 0.58
CPSF7-225ENST00000545934 CCT2P78371 535 aaKnown RBP18.69■□□□□ 0.58
CPSF7-225ENST00000545934 FOXK2Q01167 660 aa18.69■□□□□ 0.58
CPSF7-225ENST00000545934 PLA2G4FQ68DD2 849 aa18.69■□□□□ 0.58
CPSF7-225ENST00000545934 RNF168Q8IYW5 571 aaPredicted RBP18.69■□□□□ 0.58
CPSF7-225ENST00000545934 CMASQ8NFW8 434 aaPredicted RBP18.69■□□□□ 0.58
CPSF7-225ENST00000545934 EMILIN2Q9BXX0 1053 aa18.69■□□□□ 0.58
CPSF7-225ENST00000545934 RHOBTB2Q9BYZ6 727 aa18.69■□□□□ 0.58
CPSF7-225ENST00000545934 GBP3Q9H0R5 595 aa18.69■□□□□ 0.58
CPSF7-225ENST00000545934 DHX33Q9H6R0 707 aaKnown RBP18.69■□□□□ 0.58
CPSF7-225ENST00000545934 VAV3Q9UKW4 847 aa18.69■□□□□ 0.58
CPSF7-225ENST00000545934 COL4A3BPQ9Y5P4 624 aa18.69■□□□□ 0.58
CPSF7-225ENST00000545934 MYH15Q9Y2K3 1946 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 DOCK6Q96HP0 2047 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 EML1O00423 815 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 NRP1O14786 923 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 PI15O43692 258 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 PPP2R5CQ13362 524 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 LETM2Q2VYF4 491 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 FRMD5Q7Z6J6 570 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 CCDC105Q8IYK2 499 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 BLIDQ8IZY5 108 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 FAM177A1Q8N128 213 aaPredicted RBP18.68■□□□□ 0.58
CPSF7-225ENST00000545934 ZNF579Q8NAF0 562 aaKnown RBP18.68■□□□□ 0.58
CPSF7-225ENST00000545934 URGCPQ8TCY9 931 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 MINDY3Q9H8M7 445 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 RSAD1Q9HA92 442 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 KCNK12Q9HB15 430 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 MARCH5Q9NX47 278 aa18.68■□□□□ 0.58
CPSF7-225ENST00000545934 INPPL1O15357 1258 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 SLC37A4O43826 429 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 N4BP1O75113 896 aaKnown RBP18.67■□□□□ 0.58
CPSF7-225ENST00000545934 SOD2P04179 222 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 ALDH2P05091 517 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 NCLP19338 710 aaKnown RBP18.67■□□□□ 0.58
CPSF7-225ENST00000545934 KLRC2P26717 231 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 QARSP47897 775 aaKnown RBP18.67■□□□□ 0.58
CPSF7-225ENST00000545934 NPEPPSP55786 919 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 TOB2Q14106 344 aaPredicted RBP18.67■□□□□ 0.58
CPSF7-225ENST00000545934 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
CPSF7-225ENST00000545934 SRGAP1Q7Z6B7 1085 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 FLCNQ8NFG4 579 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 NKD2Q969F2 451 aaPredicted RBP18.67■□□□□ 0.58
CPSF7-225ENST00000545934 HERC2P3Q9BVR0 1158 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 KCNMB3Q9NPA1 279 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 MRPL17Q9NRX2 175 aaKnown RBP18.67■□□□□ 0.58
CPSF7-225ENST00000545934 IGSF9Q9P2J2 1179 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 KANSL3Q9P2N6 904 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 WRAP73Q9P2S5 460 aaPredicted RBP18.67■□□□□ 0.58
CPSF7-225ENST00000545934 FAN1Q9Y2M0 1017 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 PPME1Q9Y570 386 aa18.67■□□□□ 0.58
CPSF7-225ENST00000545934 MIA3Q5JRA6 1907 aa18.66■□□□□ 0.58
CPSF7-225ENST00000545934 DEXIO95424 95 aa18.66■□□□□ 0.58
CPSF7-225ENST00000545934 SSBP05455 408 aaKnown RBP eCLIP18.66■□□□□ 0.58
CPSF7-225ENST00000545934 CYP26C1Q6V0L0 522 aa18.66■□□□□ 0.58
CPSF7-225ENST00000545934 TRIM22Q8IYM9 498 aa18.66■□□□□ 0.58
CPSF7-225ENST00000545934 SMG8Q8ND04 991 aaKnown RBP18.66■□□□□ 0.58
CPSF7-225ENST00000545934 PRPF31Q8WWY3 499 aaKnown RBP18.66■□□□□ 0.58
CPSF7-225ENST00000545934 RPS6KC1Q96S38 1066 aa18.66■□□□□ 0.58
CPSF7-225ENST00000545934 DDX25Q9UHL0 483 aaKnown RBP18.66■□□□□ 0.58
CPSF7-225ENST00000545934 RIF1Q5UIP0 2472 aaKnown RBP18.66■□□□□ 0.58
CPSF7-225ENST00000545934 PTPRZ1P23471 2315 aaPredicted RBP18.65■□□□□ 0.58
CPSF7-225ENST00000545934 POMCP01189 267 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 SSRP1Q08945 709 aaKnown RBP18.65■□□□□ 0.58
CPSF7-225ENST00000545934 LAMTOR4Q0VGL1 99 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 NONOQ15233 471 aaKnown RBP eCLIP18.65■□□□□ 0.58
CPSF7-225ENST00000545934 KIAA0319Q5VV43 1072 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 GALNT17Q6IS24 598 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 COLGALT2Q8IYK4 626 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 PSPC1Q8WXF1 523 aaKnown RBP18.65■□□□□ 0.58
CPSF7-225ENST00000545934 SLC7A3Q8WY07 619 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 RTP3Q9BQQ7 232 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 RXFP1Q9HBX9 757 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 WDR6Q9NNW5 1121 aaKnown RBP18.65■□□□□ 0.58
CPSF7-225ENST00000545934 MAN1C1Q9NR34 630 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 PATJQ8NI35 1801 aa18.65■□□□□ 0.58
CPSF7-225ENST00000545934 NARSO43776 548 aaKnown RBP18.64■□□□□ 0.57
CPSF7-225ENST00000545934 DKC1O60832 514 aaKnown RBP eCLIP18.64■□□□□ 0.57
CPSF7-225ENST00000545934 PSMA5P28066 241 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 RFC5P40937 340 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 DSC1Q08554 894 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 INF2Q27J81 1249 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 TAS1R1Q7RTX1 841 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 EXOC8Q8IYI6 725 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 DTWD2Q8NBA8 298 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 CNNM3Q8NE01 707 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 CEP170P1Q96L14 293 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 FAM20AQ96MK3 541 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 AIFM3Q96NN9 605 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 FAM193BQ96PV7 902 aaPredicted RBP18.64■□□□□ 0.57
CPSF7-225ENST00000545934 UBN1Q9NPG3 1134 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 EPS15L1Q9UBC2 864 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 WNT16Q9UBV4 365 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 SSX2IPQ9Y2D8 614 aa18.64■□□□□ 0.57
CPSF7-225ENST00000545934 VWA8A3KMH1 1905 aa18.63■□□□□ 0.57
CPSF7-225ENST00000545934 TEX28O15482 410 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms