RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 A0A087WZ62 844 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 HNRNPDLO14979 420 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 PRPF6O94906 941 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 GNA14O95837 355 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 PRKCBP05771 671 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 CD44P16070 742 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 GARTP22102 1010 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 ZNF200P98182 395 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 POU5F1Q01860 360 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 ENPEPQ07075 957 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 MGAT3Q09327 533 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 KYAT1Q16773 422 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 SPATA1Q5VX52 437 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 ISM2Q6H9L7 571 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 TTI2Q6NXR4 508 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 C11orf57Q6ZUT1 292 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 FAM114A1Q8IWE2 563 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 ZC3H3Q8IXZ2 948 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 SMYD4Q8IYR2 804 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 FDXACB1Q9BRP7 624 aaPredicted RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 MKNK1Q9BUB5 465 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 TRMT13Q9NUP7 481 aaKnown RBP17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 STYXL1Q9Y6J8 313 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 ZMYM2Q9UBW7 1377 aa17.56■□□□□ 0.4
PRPF40A-212ENST00000545856 INO80B-WBP1J3KQ70 363 aa17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 MAPK13O15264 365 aa17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 TOM1L1O75674 476 aa17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 ERLIN2O94905 339 aa17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 SPAG1Q07617 926 aa17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 ZC2HC1CQ53FD0 456 aaPredicted RBP17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 TSHZ1Q6ZSZ6 1077 aa17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 KSR1Q8IVT5 923 aa17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 PAWRQ96IZ0 340 aaKnown RBP17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 KIAA1586Q9HCI6 787 aa17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 CTNND2Q9UQB3 1225 aa17.55■□□□□ 0.4
PRPF40A-212ENST00000545856 GOLGA6L19H0YKK7 550 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 LDHAP00338 332 aaKnown RBP17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 THPOP40225 353 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 LIG4P49917 911 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 PRPF4BQ13523 1007 aaKnown RBP17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 IQCB1Q15051 598 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 KIZQ2M2Z5 673 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 KLHL10Q6JEL2 608 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 TAS1R3Q7RTX0 852 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 GLIS3Q8NEA6 775 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 DHX38Q92620 1227 aaKnown RBP17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 KIFC3Q9BVG8 833 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 FGFBP2Q9BYJ0 223 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 TRPV6Q9H1D0 765 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 SEMA6BQ9H3T3 888 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 THAP9Q9H5L6 903 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 POLD4Q9HCU8 107 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 CHST12Q9NRB3 414 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 AGPAT3Q9NRZ7 376 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 TNFSF13BQ9Y275 285 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 CDY2AQ9Y6F7 541 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 DNAH12Q6ZR08 3092 aa17.54■□□□□ 0.4
PRPF40A-212ENST00000545856 N4BP3O15049 544 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 CETN3O15182 167 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 GPR182O15218 404 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 SLC16A3O15427 465 aaKnown RBP17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 TGFB1I1O43294 461 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 CKBP12277 381 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 SELPP16109 830 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 HOXD13P35453 343 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 TPD52L1Q16890 204 aaPredicted RBP17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 UVSSAQ2YD98 709 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 CSGALNACT2Q8N6G5 542 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 ZBTB10Q96DT7 871 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 BICD1Q96G01 975 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 CBX8Q9HC52 389 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 MAPK8IP1Q9UQF2 711 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 PQBP1O60828 265 aaKnown RBP17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 PROZP22891 400 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 EEF1GP26641 437 aaKnown RBP17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 RFC2P35250 354 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 TLE2Q04725 743 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 AMHR2Q16671 573 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 DCAF4L1Q3SXM0 396 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 NOTUMQ6P988 496 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 CATSPER4Q7RTX7 472 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 USP37Q86T82 979 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 NELFCDQ8IXH7 590 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 ANKRD20A12PQ8NF67 263 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 DIS3LQ8TF46 1054 aaKnown RBP17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 OSMRQ99650 979 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 ACO2Q99798 780 aaKnown RBP17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 ADPGKQ9BRR6 497 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 AGPAT5Q9NUQ2 364 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 DMAC2Q9NW81 257 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 TBX21Q9UL17 535 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 NFE2L3Q9Y4A8 694 aa17.53■□□□□ 0.4
PRPF40A-212ENST00000545856 CITO14578 2027 aa17.52■□□□□ 0.4
PRPF40A-212ENST00000545856 RALGAPA2Q2PPJ7 1873 aa17.52■□□□□ 0.39
PRPF40A-212ENST00000545856 A0A1B0GUA9 196 aa17.52■□□□□ 0.39
PRPF40A-212ENST00000545856 RPS6KA5O75582 802 aa17.52■□□□□ 0.39
PRPF40A-212ENST00000545856 NR3C1P04150 777 aa17.52■□□□□ 0.39
PRPF40A-212ENST00000545856 CLTBP09497 229 aa17.52■□□□□ 0.39
PRPF40A-212ENST00000545856 NR2F2P24468 414 aa17.52■□□□□ 0.39
PRPF40A-212ENST00000545856 MARSP56192 900 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms