RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TAX1BP1Q86VP1 789 aa16.24■□□□□ 0.19
USP28-214ENST00000545540 LDHDQ86WU2 507 aa16.24■□□□□ 0.19
USP28-214ENST00000545540 ATG4AQ8WYN0 398 aa16.24■□□□□ 0.19
USP28-214ENST00000545540 GMCL1Q96IK5 515 aa16.24■□□□□ 0.19
USP28-214ENST00000545540 ADAM33Q9BZ11 813 aa16.24■□□□□ 0.19
USP28-214ENST00000545540 YDJCA8MPS7 323 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 DNM1LO00429 736 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 DLATP10515 647 aaKnown RBP16.23■□□□□ 0.19
USP28-214ENST00000545540 GJC1P36383 396 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 POU5F1Q01860 360 aaKnown RBP16.23■□□□□ 0.19
USP28-214ENST00000545540 CD302Q8IX05 232 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 CCDC105Q8IYK2 499 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 NACC1Q96RE7 527 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 MYH11P35749 1972 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 TMEM253P0C7T8 217 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 CREB1P16220 341 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 MAPK7Q13164 816 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 STRIP1Q5VSL9 837 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 MOXD1Q6UVY6 613 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 MIER3Q7Z3K6 550 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 NOP9Q86U38 636 aaKnown RBP16.23■□□□□ 0.19
USP28-214ENST00000545540 RASGEF1CQ8N431 466 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 MASTLQ96GX5 879 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 ERP44Q9BS26 406 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 IDI2Q9BXS1 227 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 OSBPL7Q9BZF2 842 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 KCNH7Q9NS40 1196 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 SPOPO43791 374 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 ALAS1P13196 640 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 GAP43P17677 238 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 SPP2Q13103 211 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 UGCGQ16739 394 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 CCDC13Q8IYE1 715 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 PRELID2Q8N945 189 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 LMO3Q8TAP4 145 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 SEMA4DQ92854 862 aa16.23■□□□□ 0.19
USP28-214ENST00000545540 JPH2Q9BR39 696 aaPredicted RBP16.23■□□□□ 0.19
USP28-214ENST00000545540 BTNL10A8MVZ5 291 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 CCDC188H7C350 402 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 PPIP5K2O43314 1243 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 ACSL3O95573 720 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 VAMP7P51809 220 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 MMS22LQ6ZRQ5 1243 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 GMCL1P1Q8NEA9 526 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 CCDC114Q96M63 670 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 CHN1P15882 459 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 FAM102BQ5T8I3 360 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 SEPT14Q6ZU15 432 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 CALR3Q96L12 384 aaKnown RBP16.22■□□□□ 0.19
USP28-214ENST00000545540 DDX23Q9BUQ8 820 aaKnown RBP16.22■□□□□ 0.19
USP28-214ENST00000545540 EPB41L4BQ9H329 900 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 CD2APQ9Y5K6 639 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 ZHX2Q9Y6X8 837 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 TAF1LQ8IZX4 1826 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 ADRB2P07550 413 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 FNTAP49354 379 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 PMS2P54278 862 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 CCDC137Q6PK04 289 aaKnown RBP16.22■□□□□ 0.19
USP28-214ENST00000545540 SEC16BQ96JE7 1060 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 PSMD1Q99460 953 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 HEMGNQ9BXL5 484 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 FZD1Q9UP38 647 aa16.22■□□□□ 0.19
USP28-214ENST00000545540 SCN9AQ15858 1988 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 CLDN3O15551 220 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 PTENP60484 403 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 RUFY4Q6ZNE9 571 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 CCDC121Q6ZUS5 278 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 SLC5A5Q92911 643 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 HAUS2Q9NVX0 235 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 CCPG1Q9ULG6 757 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 ANKRD62A6NC57 917 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 TRAPPC3O43617 180 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 ATP9AO75110 1047 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 VCAM1P19320 739 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 TNIP1Q15025 636 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 LONRF1Q17RB8 773 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 HP1BP3Q5SSJ5 553 aaPredicted RBP16.21■□□□□ 0.19
USP28-214ENST00000545540 C1orf220Q5T0J3 134 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 ZDHHC24Q6UX98 284 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 TEKT3Q9BXF9 490 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 SLITRK6Q9H5Y7 841 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 RAVER2Q9HCJ3 691 aaKnown RBP16.21■□□□□ 0.19
USP28-214ENST00000545540 HSPBP1Q9NZL4 362 aa16.21■□□□□ 0.19
USP28-214ENST00000545540 GOLGA6L10A0A0M3HER8 536 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 KIAA0391O15091 583 aaKnown RBP16.2■□□□□ 0.18
USP28-214ENST00000545540 KRT5P13647 590 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 DUPD1Q68J44 220 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 TATDN2Q93075 761 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 KREMEN1Q96MU8 473 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 SYT11Q9BT88 431 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 EFCC1Q9HA90 598 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 ZDHHC18Q9NUE0 388 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 DMAC2Q9NW81 257 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 CTNNAL1Q9UBT7 734 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 O00370 1275 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 PDE6BP35913 854 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 NLGN1Q8N2Q7 840 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 PRMT1Q99873 361 aaKnown RBP16.2■□□□□ 0.18
USP28-214ENST00000545540 NUP85Q9BW27 656 aa16.2■□□□□ 0.18
USP28-214ENST00000545540 TMEM117Q9H0C3 514 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms