RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SMC1AQ14683 1233 aaKnown RBP23.5■■□□□ 1.35
SCARB1-210ENST00000545493 AMHR2Q16671 573 aa23.5■■□□□ 1.35
SCARB1-210ENST00000545493 TMEM184AQ6ZMB5 413 aa23.5■■□□□ 1.35
SCARB1-210ENST00000545493 TMC7Q7Z402 723 aa23.5■■□□□ 1.35
SCARB1-210ENST00000545493 SMG8Q8ND04 991 aaKnown RBP23.5■■□□□ 1.35
SCARB1-210ENST00000545493 PGBD4Q96DM1 585 aa23.5■■□□□ 1.35
SCARB1-210ENST00000545493 TMEM169Q96HH4 297 aa23.5■■□□□ 1.35
SCARB1-210ENST00000545493 CCDC43Q96MW1 224 aaKnown RBP23.5■■□□□ 1.35
SCARB1-210ENST00000545493 RSAD1Q9HA92 442 aa23.5■■□□□ 1.35
SCARB1-210ENST00000545493 DNAJB4Q9UDY4 337 aa23.5■■□□□ 1.35
SCARB1-210ENST00000545493 C2orf71A6NGG8 1288 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 DCXO43602 365 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 ERLIN2O94905 339 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 GALTP07902 379 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 ALDH7A1P49419 539 aaKnown RBP23.49■■□□□ 1.35
SCARB1-210ENST00000545493 ORC2Q13416 577 aaPredicted RBP23.49■■□□□ 1.35
SCARB1-210ENST00000545493 NBR1Q14596 966 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 ZNF174Q15697 407 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 TTC38Q5R3I4 469 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 LLGL2Q6P1M3 1020 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 CATSPER3Q86XQ3 398 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 ZNF280BQ86YH2 543 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 NOSTRINQ8IVI9 506 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 SUSD6Q92537 303 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 IGSF21Q96ID5 467 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 CPB2Q96IY4 423 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 VN1R3Q9BXE9 311 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 EIF2AQ9BY44 585 aaKnown RBP23.49■■□□□ 1.35
SCARB1-210ENST00000545493 POLR3FQ9H1D9 316 aaPredicted RBP23.49■■□□□ 1.35
SCARB1-210ENST00000545493 GPRC5CQ9NQ84 441 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 CNTNAP2Q9UHC6 1331 aa23.49■■□□□ 1.35
SCARB1-210ENST00000545493 NCLP19338 710 aaKnown RBP23.48■■□□□ 1.35
SCARB1-210ENST00000545493 TECP42680 631 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 SLC11A1P49279 550 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 TFDP1Q14186 410 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 ANKRD54Q6NXT1 300 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 POTEGQ6S5H5 508 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 FAM184AQ8NB25 1140 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 NFKBIZQ9BYH8 718 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 GBP3Q9H0R5 595 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 TUFT1Q9NNX1 390 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 IPPQ9Y573 584 aa23.48■■□□□ 1.35
SCARB1-210ENST00000545493 INO80B-WBP1J3KQ70 363 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 ALADP13716 330 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 RNASELQ05823 741 aaKnown RBP23.47■■□□□ 1.35
SCARB1-210ENST00000545493 POU5F1BQ06416 359 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 PCBP1Q15365 356 aaKnown RBP eCLIP23.47■■□□□ 1.354e-11■■■□□ 14.6
SCARB1-210ENST00000545493 NOTUMQ6P988 496 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 SYCE2Q6PIF2 218 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 MRPL43Q8N983 215 aaKnown RBP23.47■■□□□ 1.35
SCARB1-210ENST00000545493 URGCPQ8TCY9 931 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 AUTS2Q8WXX7 1259 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 CCDC51Q96ER9 411 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 POLR3CQ9BUI4 534 aaPredicted RBP23.47■■□□□ 1.35
SCARB1-210ENST00000545493 MUTYHQ9UIF7 546 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 HCFC2Q9Y5Z7 792 aa23.47■■□□□ 1.35
SCARB1-210ENST00000545493 LOC730098B7Z3J9 87 aa23.46■■□□□ 1.35
SCARB1-210ENST00000545493 B4GALT5O43286 388 aa23.46■■□□□ 1.35
SCARB1-210ENST00000545493 DDHD2O94830 711 aa23.46■■□□□ 1.35
SCARB1-210ENST00000545493 SRGAP2BP0DMP2 458 aa23.46■■□□□ 1.35
SCARB1-210ENST00000545493 AXLP30530 894 aa23.46■■□□□ 1.35
SCARB1-210ENST00000545493 VPS52Q8N1B4 723 aa23.46■■□□□ 1.35
SCARB1-210ENST00000545493 S1PR5Q9H228 398 aa23.46■■□□□ 1.35
SCARB1-210ENST00000545493 DBR1Q9UK59 544 aaKnown RBP23.46■■□□□ 1.35
SCARB1-210ENST00000545493 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.45■■□□□ 1.34
SCARB1-210ENST00000545493 CLASP2O75122 1294 aaKnown RBP23.45■■□□□ 1.34
SCARB1-210ENST00000545493 POMCP01189 267 aa23.45■■□□□ 1.34
SCARB1-210ENST00000545493 XRCC6P12956 609 aaKnown RBP eCLIP23.45■■□□□ 1.34
SCARB1-210ENST00000545493 ARF4P18085 180 aaPredicted RBP23.45■■□□□ 1.34
SCARB1-210ENST00000545493 TRAPPC10P48553 1259 aa23.45■■□□□ 1.34
SCARB1-210ENST00000545493 MAEAQ7L5Y9 396 aa23.45■■□□□ 1.34
SCARB1-210ENST00000545493 DDX53Q86TM3 631 aaKnown RBP23.45■■□□□ 1.34
SCARB1-210ENST00000545493 RNF135Q8IUD6 432 aa23.45■■□□□ 1.34
SCARB1-210ENST00000545493 C4orf32Q8N8J7 132 aa23.45■■□□□ 1.34
SCARB1-210ENST00000545493 CSRNP2Q9H175 543 aa23.45■■□□□ 1.34
SCARB1-210ENST00000545493 RNF39Q9H2S5 420 aa23.45■■□□□ 1.34
SCARB1-210ENST00000545493 CDH22Q9UJ99 828 aa23.45■■□□□ 1.34
SCARB1-210ENST00000545493 HES2Q9Y543 173 aa23.45■■□□□ 1.34
SCARB1-210ENST00000545493 TDRD15B5MCY1 1934 aaKnown RBP23.45■■□□□ 1.34
SCARB1-210ENST00000545493 CARNS1A5YM72 827 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 INPPL1O15357 1258 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 CTSAP10619 480 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 RPA1P27694 616 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 CA8P35219 290 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 MLH1P40692 756 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 GNL2Q13823 731 aaKnown RBP23.44■■□□□ 1.34
SCARB1-210ENST00000545493 CBX2Q14781 532 aaPredicted RBP23.44■■□□□ 1.34
SCARB1-210ENST00000545493 RABEP1Q15276 862 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 CDCA2Q69YH5 1023 aaPredicted RBP23.44■■□□□ 1.34
SCARB1-210ENST00000545493 CNNM3Q8NE01 707 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 ERMNQ8TAM6 284 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 CASP10Q92851 521 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 TMEM175Q9BSA9 504 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 APOL5Q9BWW9 433 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 PHF7Q9BWX1 381 aaPredicted RBP23.44■■□□□ 1.34
SCARB1-210ENST00000545493 NXF3Q9H4D5 531 aaKnown RBP23.44■■□□□ 1.34
SCARB1-210ENST00000545493 MARCH5Q9NX47 278 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 IRAK3Q9Y616 596 aa23.44■■□□□ 1.34
SCARB1-210ENST00000545493 PRR33A8MZF0 331 aa23.43■■□□□ 1.34
SCARB1-210ENST00000545493 ITGA4P13612 1032 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms