RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 MTF2Q9Y483 593 aaPredicted RBP7.93□□□□□ -1.14
LDHA-223ENST00000545215 GREB1Q4ZG55 1949 aa7.93□□□□□ -1.14
LDHA-223ENST00000545215 CAPN9O14815 690 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 CYP2E1P05181 493 aaPredicted RBP7.92□□□□□ -1.14
LDHA-223ENST00000545215 UBTFL1P0CB47 393 aaPredicted RBP7.92□□□□□ -1.14
LDHA-223ENST00000545215 CFHR1Q03591 330 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 PTPN14Q15678 1187 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 RARS2Q5T160 578 aaKnown RBP7.92□□□□□ -1.14
LDHA-223ENST00000545215 PEAR1Q5VY43 1037 aaPredicted RBP7.92□□□□□ -1.14
LDHA-223ENST00000545215 RNF43Q68DV7 783 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 NOP9Q86U38 636 aaKnown RBP7.92□□□□□ -1.14
LDHA-223ENST00000545215 SIAH1Q8IUQ4 282 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 CMTR2Q8IYT2 770 aaKnown RBP7.92□□□□□ -1.14
LDHA-223ENST00000545215 AFG1LQ8WV93 481 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 APBB2Q92870 758 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 CLDN23Q96B33 292 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 RSRP1Q9BUV0 290 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 EHD4Q9H223 541 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 CCDC86Q9H6F5 360 aaKnown RBP7.92□□□□□ -1.14
LDHA-223ENST00000545215 SLC2A4RGQ9NR83 387 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 LATS2Q9NRM7 1088 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 KBTBD4Q9NVX7 518 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 FBXO40Q9UH90 709 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 DDX49Q9Y6V7 483 aaKnown RBP7.92□□□□□ -1.14
LDHA-223ENST00000545215 RAD50Q92878 1312 aa7.92□□□□□ -1.14
LDHA-223ENST00000545215 CREBBPQ92793 2442 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 KIAA1671Q9BY89 1806 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 CELSR3Q9NYQ7 3312 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 DENND4AQ7Z401 1863 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 FIGNL2A6NMB9 653 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 FAM170BA6NMN3 283 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 GNAI2P04899 355 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 RLBP1P12271 317 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 EDN3P14138 238 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 ATF4P18848 351 aaPredicted RBP7.91□□□□□ -1.14
LDHA-223ENST00000545215 POU3F2P20265 443 aaPredicted RBP7.91□□□□□ -1.14
LDHA-223ENST00000545215 SHMT1P34896 483 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 RPS9P46781 194 aaKnown RBP7.91□□□□□ -1.14
LDHA-223ENST00000545215 CSRP3P50461 194 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 RASGRF1Q13972 1273 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 PGBD3Q8N328 593 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 C12orf76Q8N812 135 aaPredicted RBP7.91□□□□□ -1.14
LDHA-223ENST00000545215 CHST13Q8NET6 341 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 OR13H1Q8NG92 308 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 PANK1Q8TE04 598 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 NXPE3Q969Y0 559 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 GPRASP2Q96D09 838 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 HDAC6Q9UBN7 1215 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 TMX2Q9Y320 296 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 HCFC2Q9Y5Z7 792 aa7.91□□□□□ -1.14
LDHA-223ENST00000545215 LAMA1P25391 3075 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 HIDE1A8MVS5 230 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 EFSO43281 561 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 SASH3O75995 380 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 BAG3O95817 575 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 AVPP01185 164 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 FAM157BP0CG42 384 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 THPOP40225 353 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 RFX5P48382 616 aaPredicted RBP7.9□□□□□ -1.14
LDHA-223ENST00000545215 ATP2B3Q16720 1220 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 DAB2IPQ5VWQ8 1189 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 KANK3Q6NY19 840 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 RASGRP2Q7LDG7 609 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 TRIM46Q7Z4K8 759 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 FAM181AQ8N9Y4 354 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 MORC4Q8TE76 937 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 KAT2BQ92831 832 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 MYADMQ96S97 322 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 NOL10Q9BSC4 688 aaKnown RBP7.9□□□□□ -1.14
LDHA-223ENST00000545215 GSX2Q9BZM3 304 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 ARRDC1-AS1Q9H2J1 176 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 ZBTB40Q9NUA8 1239 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 PPP4R2Q9NY27 417 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 AATFQ9NY61 560 aaKnown RBP eCLIP7.9□□□□□ -1.14
LDHA-223ENST00000545215 KANSL3Q9P2N6 904 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 SALL4Q9UJQ4 1053 aa7.9□□□□□ -1.14
LDHA-223ENST00000545215 FOCADQ5VW36 1801 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 C4orf47A7E2U8 309 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 ENPP3O14638 875 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 HMMRO75330 724 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 CIAO1O76071 339 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 CNR2P34972 360 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 CCINQ13939 588 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 UBXN2BQ14CS0 331 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 PLPP4Q5VZY2 271 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 CCDC149Q6ZUS6 474 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 RPAP2Q8IXW5 612 aaPredicted RBP7.89□□□□□ -1.15
LDHA-223ENST00000545215 C7orf31Q8N865 590 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 ABCB6Q9NP58 842 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 TMEM260Q9NX78 707 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 PPM1HQ9ULR3 514 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 NOTCH2Q04721 2471 aa7.89□□□□□ -1.15
LDHA-223ENST00000545215 A0A087WV48 116 aa7.88□□□□□ -1.15
LDHA-223ENST00000545215 AXIN1O15169 862 aa7.88□□□□□ -1.15
LDHA-223ENST00000545215 NKRFO15226 690 aaKnown RBP eCLIP7.88□□□□□ -1.153e-6■□□□□ 8.8
LDHA-223ENST00000545215 MMP20O60882 483 aa7.88□□□□□ -1.15
LDHA-223ENST00000545215 N4BP1O75113 896 aaKnown RBP7.88□□□□□ -1.15
LDHA-223ENST00000545215 FGF18O76093 207 aa7.88□□□□□ -1.15
LDHA-223ENST00000545215 THBS1P07996 1170 aa7.88□□□□□ -1.15
LDHA-223ENST00000545215 TARSP26639 723 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms