RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TARBP2Q15633 366 aaKnown RBP10.6□□□□□ -0.71
CHD4-212ENST00000545083 ZNF528Q3MIS6 628 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 TTC22Q5TAA0 569 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 KIAA0319Q5VV43 1072 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 CYP26C1Q6V0L0 522 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 GET4Q7L5D6 327 aaPredicted RBP10.6□□□□□ -0.71
CHD4-212ENST00000545083 TEX2Q8IWB9 1127 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 RNF168Q8IYW5 571 aaPredicted RBP10.6□□□□□ -0.71
CHD4-212ENST00000545083 RUFY2Q8WXA3 655 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 CEP89Q96ST8 783 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 HERC2P3Q9BVR0 1158 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
CHD4-212ENST00000545083 RWDD1Q9H446 243 aaPredicted RBP10.6□□□□□ -0.71
CHD4-212ENST00000545083 PARD6AQ9NPB6 346 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 SPATA6Q9NWH7 488 aaPredicted RBP10.6□□□□□ -0.71
CHD4-212ENST00000545083 BARHL2Q9NY43 387 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 SMG5Q9UPR3 1016 aaKnown RBP10.6□□□□□ -0.71
CHD4-212ENST00000545083 FAN1Q9Y2M0 1017 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 SAMM50Q9Y512 469 aa10.6□□□□□ -0.71
CHD4-212ENST00000545083 F8W810 466 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 LAMTOR5O43504 91 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 ALDH2P05091 517 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 ADH1AP07327 375 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 ADRB1P08588 477 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 SFPQP23246 707 aaKnown RBP eCLIP10.59□□□□□ -0.71
CHD4-212ENST00000545083 RAB27AP51159 221 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 CSTF1Q05048 431 aaKnown RBP10.59□□□□□ -0.71
CHD4-212ENST00000545083 SNW1Q13573 536 aaKnown RBP10.59□□□□□ -0.71
CHD4-212ENST00000545083 PARM1Q6UWI2 310 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 SGMS1Q86VZ5 419 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 KSR1Q8IVT5 923 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 ZBTB44Q8NCP5 570 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 FGF14Q92915 247 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 LENG9Q96B70 501 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 SH2D3AQ9BRG2 576 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 TMEM175Q9BSA9 504 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 DDX23Q9BUQ8 820 aaKnown RBP10.59□□□□□ -0.71
CHD4-212ENST00000545083 NT5C3AQ9H0P0 336 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 RXFP1Q9HBX9 757 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 DISC1Q9NRI5 854 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 NRBP2Q9NSY0 501 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 TCEAL9Q9UHQ7 104 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 RALYQ9UKM9 306 aaKnown RBP10.59□□□□□ -0.71
CHD4-212ENST00000545083 FBXO4Q9UKT5 387 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 CDV3Q9UKY7 258 aaKnown RBP10.59□□□□□ -0.71
CHD4-212ENST00000545083 PRG3Q9Y2Y8 225 aaPredicted RBP10.59□□□□□ -0.71
CHD4-212ENST00000545083 PCDHB2Q9Y5E7 798 aa10.59□□□□□ -0.71
CHD4-212ENST00000545083 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
CHD4-212ENST00000545083 IGKV6-21A0A0C4DH24 114 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 KANSL1LA0AUZ9 987 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 PRR5-ARHGAP8B1AHC4 643 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 WDR64B1ANS9 1081 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 TGM5O43548 720 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 EDIL3O43854 480 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 LILRB5O75023 590 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 STBD1O95210 358 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 POMCP01189 267 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 SKIP12755 728 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 CD72P21854 359 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 SDHBP21912 280 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 ARHGAP8P85298 464 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 SETQ01105 290 aaPredicted RBP10.58□□□□□ -0.72
CHD4-212ENST00000545083 LMNB2Q03252 620 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 MTERF2Q49AM1 385 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 PRR16Q569H4 304 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 APOA5Q6Q788 366 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 TSSK4Q6SA08 328 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 CATSPER4Q7RTX7 472 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 MRPL10Q7Z7H8 261 aaKnown RBP10.58□□□□□ -0.72
CHD4-212ENST00000545083 PALB2Q86YC2 1186 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
CHD4-212ENST00000545083 URGCPQ8TCY9 931 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 NELL1Q92832 810 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 GJA10Q969M2 543 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 B3GALT6Q96L58 329 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 RTKNQ9BST9 563 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 EPC1Q9H2F5 836 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 RSAD1Q9HA92 442 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 PIDD1Q9HB75 910 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHD4-212ENST00000545083 STK39Q9UEW8 545 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 PCDHGA2Q9Y5H1 932 aa10.58□□□□□ -0.72
CHD4-212ENST00000545083 CEP295Q9C0D2 2601 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 DOCK6Q96HP0 2047 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 CNOT1A5YKK6 2376 aaKnown RBP10.57□□□□□ -0.72
CHD4-212ENST00000545083 FAM170BA6NMN3 283 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 CHMP2AO43633 222 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 GLUD2P49448 558 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 NTHL1P78549 312 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 DSG1Q02413 1049 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 UBXN2BQ14CS0 331 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 MLF2Q15773 248 aaPredicted RBP10.57□□□□□ -0.72
CHD4-212ENST00000545083 UBXN11Q5T124 520 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 LILRA6Q6PI73 481 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 ZNF410Q86VK4 478 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 RHPN2Q8IUC4 686 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 GLYCTKQ8IVS8 523 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 COLGALT2Q8IYK4 626 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 HDAC7Q8WUI4 952 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms