RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 UBE3AQ05086 875 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 RNASELQ05823 741 aaKnown RBP17.37■□□□□ 0.37
CCDC78-216ENST00000544996 DMP1Q13316 513 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-216ENST00000544996 AMHR2Q16671 573 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 NOMO2Q5JPE7 1267 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 FAM173BQ6P4H8 233 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 SLC27A1Q6PCB7 646 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 KCNT2Q6UVM3 1135 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 C1orf186Q6ZWK4 172 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 KCNK18Q7Z418 384 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 SYT2Q8N9I0 419 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-216ENST00000544996 URGCPQ8TCY9 931 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 BSNDQ8WZ55 320 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 PPP2R3CQ969Q6 453 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 RUSC1Q9BVN2 902 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 FZD8Q9H461 694 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 RSAD1Q9HA92 442 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 POLD4Q9HCU8 107 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 KCND2Q9NZV8 630 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 KANSL3Q9P2N6 904 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 HCSTQ9UBK5 93 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 PUF60Q9UHX1 559 aaKnown RBP17.37■□□□□ 0.37
CCDC78-216ENST00000544996 KCNG1Q9UIX4 513 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 INPP5FQ9Y2H2 1132 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 CNTNAP2Q9UHC6 1331 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 RALGAPA2Q2PPJ7 1873 aa17.37■□□□□ 0.37
CCDC78-216ENST00000544996 EYSQ5T1H1 3165 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 CCDC169A6NNP5 214 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 B4GALT5O43286 388 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 OFD1O75665 1012 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 PLA2G4BP0C869 781 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 ITGA4P13612 1032 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 GUCY2CP25092 1073 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 MARCKSP29966 332 aaPredicted RBP17.36■□□□□ 0.37
CCDC78-216ENST00000544996 KRT17Q04695 432 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 PRPF4BQ13523 1007 aaKnown RBP17.36■□□□□ 0.37
CCDC78-216ENST00000544996 PTPAQ15257 358 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 FAM187BQ17R55 369 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 TMEM119Q4V9L6 283 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 MICAL1Q8TDZ2 1067 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 POF1BQ8WVV4 589 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 ASB2Q96Q27 587 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 C17orf75Q9HAS0 396 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 SPG21Q9NZD8 308 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 IPPQ9Y573 584 aa17.36■□□□□ 0.37
CCDC78-216ENST00000544996 PRRC2BQ5JSZ5 2229 aaKnown RBP17.36■□□□□ 0.37
CCDC78-216ENST00000544996 TRANK1O15050 2925 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 MEIS3P2A8K0S8 358 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 ACKR2O00590 384 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 NCK2O43639 380 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 CSPG5O95196 566 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 PRKCBP05771 671 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 LIG1P18858 919 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 TXLNAP40222 546 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 PEX3P56589 373 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 GRIN1Q05586 938 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 TCEAL5Q5H9L2 206 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 TJAP1Q5JTD0 557 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 AGMOQ6ZNB7 445 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 SMG8Q8ND04 991 aaKnown RBP17.35■□□□□ 0.37
CCDC78-216ENST00000544996 SYMPKQ92797 1274 aaKnown RBP17.35■□□□□ 0.37
CCDC78-216ENST00000544996 ZNF396Q96N95 335 aaPredicted RBP17.35■□□□□ 0.37
CCDC78-216ENST00000544996 EIF2AQ9BY44 585 aaKnown RBP17.35■□□□□ 0.37
CCDC78-216ENST00000544996 CCSER1Q9C0I3 900 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 TBC1D13Q9NVG8 400 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
CCDC78-216ENST00000544996 RBM19Q9Y4C8 960 aaKnown RBP17.35■□□□□ 0.37
CCDC78-216ENST00000544996 SRPRBQ9Y5M8 271 aaKnown RBP17.35■□□□□ 0.37
CCDC78-216ENST00000544996 PHLPP2Q6ZVD8 1323 aa17.35■□□□□ 0.37
CCDC78-216ENST00000544996 K7ERI5 159 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 N4BP3O15049 544 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 ZC3H11AO75152 810 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC78-216ENST00000544996 NPTX2P47972 431 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 SLC12A3P55017 1021 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 BCAR1P56945 870 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 PLCB3Q01970 1234 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 RAD51AP2Q09MP3 1159 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 CAMK1Q14012 370 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 SLC39A14Q15043 492 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 KARSQ15046 597 aaKnown RBP17.34■□□□□ 0.37
CCDC78-216ENST00000544996 NLRC5Q86WI3 1866 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 MRPS27Q92552 414 aaKnown RBP17.34■□□□□ 0.37
CCDC78-216ENST00000544996 FAM193BQ96PV7 902 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-216ENST00000544996 USP28Q96RU2 1077 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 ADPGKQ9BRR6 497 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 KIFC3Q9BVG8 833 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 CCDC113Q9H0I3 377 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 KMT5AQ9NQR1 393 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 TLR9Q9NR96 1032 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 CCDC39Q9UFE4 941 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 FBXO2Q9UK22 296 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-216ENST00000544996 LZTS1Q9Y250 596 aa17.34■□□□□ 0.37
CCDC78-216ENST00000544996 NPTXRO95502 500 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 PLCG1P19174 1290 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 DNAJB1P25685 340 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 PBX3P40426 434 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 SMTNP53814 917 aa17.33■□□□□ 0.36
CCDC78-216ENST00000544996 TFF2Q03403 129 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms