RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 YWHABP31946 246 aaKnown RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 SPIRE1Q08AE8 756 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 CTTNQ14247 550 aaKnown RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 KIZQ2M2Z5 673 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 TMEM266Q2M3C6 531 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 XKR9Q5GH70 373 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 LARP1BQ659C4 914 aaKnown RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 ANO5Q75V66 913 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 TMCO2Q7Z6W1 182 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 LRRC71Q8N4P6 559 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 LINC01465Q8N7H1 131 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 ERMNQ8TAM6 284 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 SLC7A3Q8WY07 619 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 CLP1Q92989 425 aaKnown RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 CEP170P1Q96L14 293 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 CCDC43Q96MW1 224 aaKnown RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 SCLT1Q96NL6 688 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 PPP1R16BQ96T49 567 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 YME1L1Q96TA2 773 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 OSMRQ99650 979 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 RAB34Q9BZG1 259 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 PRKD2Q9BZL6 878 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 INO80BQ9C086 356 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 GZF1Q9H116 711 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 PRDM12Q9H4Q4 367 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 AGO3Q9H9G7 860 aaKnown RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 CYP26B1Q9NR63 512 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 RGL1Q9NZL6 768 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 NOC2LQ9Y3T9 749 aaKnown RBP8.23□□□□□ -1.09
CPSF7-224ENST00000544990 LAMA3Q16787 3333 aa8.23□□□□□ -1.09
CPSF7-224ENST00000544990 TTC3P53804 2025 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 CUL9Q8IWT3 2517 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 IGKV6-21A0A0C4DH24 114 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 DENND3A2RUS2 1198 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 TMEM150BA6NC51 233 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 LAD1O00515 517 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 GAS2O43903 313 aaKnown RBP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 LYPLA2O95372 231 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 XRCC6P12956 609 aaKnown RBP eCLIP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 ZSCAN20P17040 1043 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 PDCP20941 246 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 EIF4BP23588 611 aaKnown RBP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 TECP42680 631 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 GPC3P51654 580 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 POLGP54098 1239 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 NPEPPSP55786 919 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 HTRA4P83105 476 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 CYP4A11Q02928 519 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 TAP1Q03518 808 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 CUL4AQ13619 759 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 RILPL1Q5EBL4 403 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 PPP1R26Q5T8A7 1209 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 PLA2G4FQ68DD2 849 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 CYP2U1Q7Z449 544 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 TCP11Q8WWU5 503 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 TGS1Q96RS0 853 aaKnown RBP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 HSD17B14Q9BPX1 270 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 SH2D3AQ9BRG2 576 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 GCOM2Q9BZD3 368 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 TMEM60Q9H2L4 133 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 ERVK-5Q9HDB9 667 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 TUFT1Q9NNX1 390 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 TMPRSS4Q9NRS4 437 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 C1orf112Q9NSG2 853 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 ANKEF1Q9NU02 776 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 SUCLA2Q9P2R7 463 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-224ENST00000544990 LRFN2Q9ULH4 789 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 ST3GAL5Q9UNP4 418 aa8.22□□□□□ -1.09
CPSF7-224ENST00000544990 TTC24A2A3L6 582 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-224ENST00000544990 LINC01553A4QN01 128 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 SFI1A8K8P3 1242 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 ASAP2O43150 1006 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 DARSP14868 501 aaKnown RBP8.21□□□□□ -1.1
CPSF7-224ENST00000544990 IGFBP4P22692 258 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 SCTRP47872 440 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 ERVK-21P61565 698 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 PDIA5Q14554 519 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 HAUS3Q68CZ6 603 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 SLC24A5Q71RS6 500 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 RTN4RL1Q86UN2 441 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-224ENST00000544990 ZNF410Q86VK4 478 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 FAM228AQ86W67 206 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 RHPN2Q8IUC4 686 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 NPAS4Q8IUM7 802 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 MAFAQ8NHW3 353 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-224ENST00000544990 SNIP1Q8TAD8 396 aaKnown RBP8.21□□□□□ -1.1
CPSF7-224ENST00000544990 TMEM40Q8WWA1 233 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 PSPC1Q8WXF1 523 aaKnown RBP8.21□□□□□ -1.1
CPSF7-224ENST00000544990 ARNTL2Q8WYA1 636 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 SAMD11Q96NU1 681 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 NACC1Q96RE7 527 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 CEP89Q96ST8 783 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 ADAM2Q99965 735 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 POLR3CQ9BUI4 534 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-224ENST00000544990 ADAMTS10Q9H324 1103 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 DHX33Q9H6R0 707 aaKnown RBP8.21□□□□□ -1.1
CPSF7-224ENST00000544990 CERS4Q9HA82 394 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 RGS18Q9NS28 235 aa8.21□□□□□ -1.1
CPSF7-224ENST00000544990 WRAP73Q9P2S5 460 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-224ENST00000544990 KIAA1024Q9UPX6 916 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms