RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ZNF445P59923 1031 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 ACTR2P61160 394 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 TMEM62Q0P6H9 643 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 COASYQ13057 564 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 PAK2Q13177 524 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 PLCB4Q15147 1175 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 CT47A1Q5JQC4 288 aaPredicted RBP7.32□□□□□ -1.24
CDCA3-209ENST00000544610 CNNM4Q6P4Q7 775 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 SHC4Q6S5L8 630 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 FAM43BQ6ZT52 329 aaPredicted RBP7.32□□□□□ -1.24
CDCA3-209ENST00000544610 BMP8AQ7Z5Y6 402 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 ADGRD2Q7Z7M1 963 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 KLHL23Q8NBE8 558 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 GPT2Q8TD30 523 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 TRAPPC12Q8WVT3 735 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 POF1BQ8WVV4 589 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 SPIRE2Q8WWL2 714 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 HAS1Q92839 578 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 SLC5A5Q92911 643 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 CELF4Q9BZC1 486 aaKnown RBP7.32□□□□□ -1.24
CDCA3-209ENST00000544610 LRRC27Q9C0I9 530 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 TMX1Q9H3N1 280 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 AZI2Q9H6S1 392 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 TTC12Q9H892 705 aaPredicted RBP7.32□□□□□ -1.24
CDCA3-209ENST00000544610 KCNH7Q9NS40 1196 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 CCDC39Q9UFE4 941 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 KCNH3Q9ULD8 1083 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 DMDP11532 3685 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 IGKV6D-21A0A0A0MT36 114 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 VWA3AA6NCI4 1184 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 POM121CA8CG34 1229 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 FAM86B1E9PN63 330 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 IPO5O00410 1097 aaKnown RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 WNT7AO00755 349 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 ADAMTS3O15072 1205 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 SLC37A4O43826 429 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 DKC1O60832 514 aaKnown RBP eCLIP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 GADD45BO75293 160 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 PSMD10O75832 226 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 AP1G2O75843 785 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 ZNF202O95125 648 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 ATG7O95352 703 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 LYPLA2O95372 231 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 TDP2O95551 362 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 FAM86B2P0C5J1 330 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 XRCC6P12956 609 aaKnown RBP eCLIP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 PFKFB1P16118 471 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 RPA1P27694 616 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 MARCKSP29966 332 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 NRIP1P48552 1158 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 SARSP49591 514 aaKnown RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 GATMP50440 423 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 SLC26A2P50443 739 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 STAT5BP51692 787 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 TTC3P53804 2025 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 AMPD3Q01432 767 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 KRT76Q01546 638 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 CEBPZQ03701 1054 aaKnown RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 UBE3AQ05086 875 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 SPIRE1Q08AE8 756 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 ITGB3BPQ13352 177 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 CBX2Q14781 532 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 FOXD4L6Q3SYB3 417 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 PAN2Q504Q3 1202 aaKnown RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 PRR16Q569H4 304 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 ARSIQ5FYB1 569 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 KRT79Q5XKE5 535 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 ZNF746Q6NUN9 644 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 MTHFD1LQ6UB35 978 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 FOXD4L3Q6VB84 417 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 PLA2G4DQ86XP0 818 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 SMAP1Q8IYB5 467 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 NME8Q8N427 588 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 TRIML1Q8N9V2 468 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 FSIP1Q8NA03 581 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 CYP2W1Q8TAV3 490 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 SPATA20Q8TB22 786 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 CALML4Q96GE6 196 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 SDF4Q9BRK5 362 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 POLR3CQ9BUI4 534 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 CSRNP2Q9H175 543 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 NUP62CLQ9H1M0 184 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 TMEM60Q9H2L4 133 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 CLSTN2Q9H4D0 955 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 AGO4Q9HCK5 861 aaKnown RBP7.31□□□□□ -1.24
CDCA3-209ENST00000544610 ERVK-5Q9HDB9 667 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 DISC1Q9NRI5 854 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 DACT1Q9NYF0 836 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 KCND2Q9NZV8 630 aa7.31□□□□□ -1.24
CDCA3-209ENST00000544610 FSD2A1L4K1 749 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 TMEM221A6NGB7 291 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 M0R296 226 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 SPTLC1O15269 473 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 MSH4O15457 936 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 MARCH6O60337 910 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 MGEA5O60502 916 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 NR1I2O75469 434 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 CCNE2O96020 404 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 ARP10275 920 aa7.3□□□□□ -1.24
CDCA3-209ENST00000544610 ATP2B1P20020 1258 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms