RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PCDHA9Q9Y5H5 950 aa7.31□□□□□ -1.24
CPSF7-222ENST00000544585 LAMA3Q16787 3333 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 NEMP1O14524 444 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 TERTO14746 1132 aaKnown RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 SCGB1D2O95969 90 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 HOXC6P09630 235 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 UBTFL1P0CB47 393 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 FOSL2P15408 326 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 USP14P54578 494 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 GUCY1A3Q02108 690 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 SNW1Q13573 536 aaKnown RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 RRP1BQ14684 758 aaKnown RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 LRRC41Q15345 812 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 DPY19L1Q2PZI1 675 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 LYPD4Q6UWN0 246 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 ATF7IPQ6VMQ6 1270 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 MTDHQ86UE4 582 aaKnown RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 ZBTB46Q86UZ6 589 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 PASD1Q8IV76 773 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 MYO1HQ8N1T3 1032 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 TMEM130Q8N3G9 435 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 NEDD1Q8NHV4 660 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 MYLIPQ8WY64 445 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 BADQ92934 168 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 NSUN4Q96CB9 384 aaKnown RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 PAGR1Q9BTK6 254 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 PLVAPQ9BX97 442 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 CCDC8Q9H0W5 538 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 PORCNQ9H237 461 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 RAI14Q9P0K7 980 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 SAMD15Q9P1V8 674 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 APOBEC2Q9Y235 224 aaKnown RBP7.3□□□□□ -1.24
CPSF7-222ENST00000544585 ATP11BQ9Y2G3 1177 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 ALPK3Q96L96 1907 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 A0A1B0GUL6 1792 aa7.3□□□□□ -1.24
CPSF7-222ENST00000544585 A0A1B0GUL7 405 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 E2F8A0AVK6 867 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 KBTBD13C9JR72 458 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 F8W735 103 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-222ENST00000544585 AKAP10O43572 662 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 CAND2O75155 1236 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 POU4F1Q01851 419 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 SCRN1Q12765 414 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 C9orf50Q5SZB4 431 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 CWF19L1Q69YN2 538 aaKnown RBP7.29□□□□□ -1.24
CPSF7-222ENST00000544585 CATSPERGQ6ZRH7 1159 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 DPP9Q86TI2 863 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 TEX11Q8IYF3 940 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 CNTD1Q8N815 330 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 SPATA5Q8NB90 893 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 CHMP4CQ96CF2 233 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 TRIM11Q96F44 468 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 C1orf159Q96HA4 380 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 NEUROD6Q96NK8 337 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 YIPF4Q9BSR8 244 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 CEP41Q9BYV8 373 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 TTYH1Q9H313 450 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-222ENST00000544585 SEMA6CQ9H3T2 930 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 CHST7Q9NS84 486 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 HOXC10Q9NYD6 342 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 KCNH3Q9ULD8 1083 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 RNF112Q9ULX5 631 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 SPEF1Q9Y4P9 236 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 RFX7Q2KHR2 1363 aa7.29□□□□□ -1.24
CPSF7-222ENST00000544585 COL2A1P02458 1487 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-222ENST00000544585 SIGLEC6O43699 453 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 PEX10O60683 326 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 LRRN2O75325 713 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 NFICP08651 508 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 UQCRFS1P1P0C7P4 283 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 BPIP17213 487 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 ADORA1P30542 326 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 GNALP38405 381 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 PREPP48147 710 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 PIN1Q13526 163 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-222ENST00000544585 SNX17Q15036 470 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 ALDH1L2Q3SY69 923 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 GJC2Q5T442 439 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-222ENST00000544585 WDR78Q5VTH9 848 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 OLFML2BQ68BL8 750 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 CDPF1Q6NVV7 123 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 KCNT2Q6UVM3 1135 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 LBX2Q6XYB7 198 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 TMC3Q7Z5M5 1100 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 KIF18BQ86Y91 864 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 ATXN2LQ8WWM7 1075 aaKnown RBP7.28□□□□□ -1.24
CPSF7-222ENST00000544585 PMM1Q92871 262 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 COX4I2Q96KJ9 171 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 C12orf42Q96LP6 360 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 ZFYVE21Q9BQ24 234 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 PRDM5Q9NQX1 630 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-222ENST00000544585 ENAMQ9NRM1 1142 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 FLRT1Q9NZU1 646 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 HMG20BQ9P0W2 317 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 TRHDEQ9UKU6 1024 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 PCDHA8Q9Y5H6 950 aa7.28□□□□□ -1.24
CPSF7-222ENST00000544585 H0Y8X5 98 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 PIK3R2O00459 728 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms