RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	CSRNP2	Q9H175	543 aa		13.98	□□□□□ -0.17
CLPB-213	ENST00000544382	CWH43	Q9H720	699 aa		13.98	□□□□□ -0.17
CLPB-213	ENST00000544382	FOXD4L1	Q9NU39	408 aa		13.98	□□□□□ -0.17
CLPB-213	ENST00000544382	INPP5F	Q9Y2H2	1132 aa		13.98	□□□□□ -0.17
CLPB-213	ENST00000544382	REV3L	O60673	3130 aa		13.98	□□□□□ -0.17
CLPB-213	ENST00000544382	MYH11	P35749	1972 aa		13.98	□□□□□ -0.17
CLPB-213	ENST00000544382	ATG2A	Q2TAZ0	1938 aa		13.98	□□□□□ -0.17
CLPB-213	ENST00000544382	PLXNA4	Q9HCM2	1894 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	PHLPP2	Q6ZVD8	1323 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	FSD2	A1L4K1	749 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	FGF18	O76093	207 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	CSPG5	O95196	566 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	ITGA4	P13612	1032 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	NCL	P19338	710 aa	Known RBP	13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	CDC25A	P30304	524 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	LONP1	P36776	959 aa	Known RBP	13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	UBA7	P41226	1012 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	EFNA5	P52803	228 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	SF3A1	Q15459	793 aa	Known RBP	13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	HYI	Q5T013	277 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	KCNT2	Q6UVM3	1135 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	MRPL10	Q7Z7H8	261 aa	Known RBP	13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	LPP	Q93052	612 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	CPB2	Q96IY4	423 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	FAM193B	Q96PV7	902 aa	Predicted RBP	13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	UBE2Z	Q9H832	354 aa	Predicted RBP	13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	RSAD1	Q9HA92	442 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	TLR9	Q9NR96	1032 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	SPG21	Q9NZD8	308 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	KANSL3	Q9P2N6	904 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	KCNG1	Q9UIX4	513 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382	LZTS1	Q9Y250	596 aa		13.97	□□□□□ -0.17
CLPB-213	ENST00000544382		E9PMD0	336 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	STX6	O43752	255 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	SSB	P05455	408 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	ARF4	P18085	180 aa	Predicted RBP	13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	PLCB3	Q01970	1234 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	TFF2	Q03403	129 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	DMP1	Q13316	513 aa	Predicted RBP	13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	FAM187B	Q17R55	369 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	LONRF3	Q496Y0	759 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	SLC27A1	Q6PCB7	646 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	PPP4R3CP	Q6ZMV5	832 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	LRRC55	Q6ZSA7	311 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	EP400NL	Q6ZTU2	488 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	CABP7	Q86V35	215 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	MICAL1	Q8TDZ2	1067 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	PABPC5	Q96DU9	382 aa	Known RBP	13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	ADPGK	Q9BRR6	497 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	MMTAG2	Q9BU76	263 aa	Known RBP	13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	C17orf75	Q9HAS0	396 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	KCND2	Q9NZV8	630 aa		13.96	□□□□□ -0.17
CLPB-213	ENST00000544382	N4BP3	O15049	544 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	OFD1	O75665	1012 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	PRKCB	P05771	671 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	KCNA5	P22460	613 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	BCAR1	P56945	870 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	REST	Q13127	1097 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	PRPF4B	Q13523	1007 aa	Known RBP	13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	AMHR2	Q16671	573 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	UBXN11	Q5T124	520 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	MRPS27	Q92552	414 aa	Known RBP	13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	TMEM169	Q96HH4	297 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	FZD8	Q9H461	694 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	ENTPD7	Q9NQZ7	604 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	TBC1D13	Q9NVG8	400 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	HCST	Q9UBK5	93 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	STK39	Q9UEW8	545 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	FAM50B	Q9Y247	325 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	IPP	Q9Y573	584 aa		13.95	□□□□□ -0.18
CLPB-213	ENST00000544382	TCF20	Q9UGU0	1960 aa	Known RBP	13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	TDRD15	B5MCY1	1934 aa	Known RBP	13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.94	□□□□□ -0.18
CLPB-213	ENST00000544382		A0A1B0GUA9	196 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	CCDC169	A6NNP5	214 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	ACKR2	O00590	384 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	B4GALT5	O43286	388 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	HIP1R	O75146	1068 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	PLA2G4B	P0C869	781 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	LIG1	P18858	919 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	GUCY2C	P25092	1073 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	DNAJB1	P25685	340 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	TXLNA	P40222	546 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	PUS10	Q3MIT2	529 aa	Known RBP	13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	RINT1	Q6NUQ1	792 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	AGMO	Q6ZNB7	445 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	SYT2	Q8N9I0	419 aa	Predicted RBP	13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	BSND	Q8WZ55	320 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	CDCA3	Q99618	268 aa	Predicted RBP	13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	EIF2A	Q9BY44	585 aa	Known RBP	13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	NGRN	Q9NPE2	291 aa	Known RBP	13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	CLDND1	Q9NY35	253 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	MTMR6	Q9Y217	621 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	GIT1	Q9Y2X7	761 aa		13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	RBM19	Q9Y4C8	960 aa	Known RBP	13.94	□□□□□ -0.18
CLPB-213	ENST00000544382	ZMYM2	Q9UBW7	1377 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms