RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 RLFQ13129 1914 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 BRCA1P38398 1863 aaKnown RBP19.17■□□□□ 0.66
SCARB1-208ENST00000544327 SLC16A4O15374 487 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 MYCLP12524 364 aaPredicted RBP19.17■□□□□ 0.66
SCARB1-208ENST00000544327 GCLMP48507 274 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 MXI1P50539 228 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 OAZ1P54368 228 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 SKOR1P84550 965 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 DGKZQ13574 1117 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 PPP2R5EQ16537 467 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 TTMPQ5BVD1 217 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 XKR9Q5GH70 373 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 C11orf63Q6NUN7 778 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 VSIG10LQ86VR7 867 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 MAP4K3Q8IVH8 894 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 TMEM161BQ8NDZ6 487 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 REPS2Q8NFH8 660 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 MOV10L1Q9BXT6 1211 aaKnown RBP19.17■□□□□ 0.66
SCARB1-208ENST00000544327 MAF1Q9H063 256 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 TMEM117Q9H0C3 514 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 THAP2Q9H0W7 228 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 C17orf75Q9HAS0 396 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 TAS2R14Q9NYV8 317 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 TBX20Q9UMR3 447 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 ARID2Q68CP9 1835 aa19.17■□□□□ 0.66
SCARB1-208ENST00000544327 A6NNZ2 444 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 LRRN2O75325 713 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 EGFRP00533 1210 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 ADRB2P07550 413 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 CCND2P30279 289 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 TUBB8Q3ZCM7 444 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 FAM71AQ8IYT1 594 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 CCDC26Q8TAB7 109 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 NTPCRQ9BSD7 190 aaKnown RBP19.16■□□□□ 0.66
SCARB1-208ENST00000544327 AP1M1Q9BXS5 423 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 GPRC5CQ9NQ84 441 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 ZNF112Q9UJU3 913 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 COQ4Q9Y3A0 265 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 WDR81Q562E7 1941 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 PHIPQ8WWQ0 1821 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 MTA2O94776 668 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 ABCB4P21439 1286 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 SMTNP53814 917 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 BACE1P56817 501 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 POU5F1Q01860 360 aaKnown RBP19.16■□□□□ 0.66
SCARB1-208ENST00000544327 EMC10Q5UCC4 262 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 DCAF15Q66K64 600 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 LRIG3Q6UXM1 1119 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 MAATS1Q7Z4T9 603 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 NLRX1Q86UT6 975 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 PALB2Q86YC2 1186 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 SLC20A1Q8WUM9 679 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 ARL8AQ96BM9 186 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 C12orf42Q96LP6 360 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 FBXL18Q96ME1 805 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 NAP1L3Q99457 506 aaPredicted RBP19.16■□□□□ 0.66
SCARB1-208ENST00000544327 RNF146Q9NTX7 359 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 PCDHA10Q9Y5I2 948 aa19.16■□□□□ 0.66
SCARB1-208ENST00000544327 TMEM150BA6NC51 233 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 ZNF233A6NK53 670 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 DKC1O60832 514 aaKnown RBP eCLIP19.15■□□□□ 0.66
SCARB1-208ENST00000544327 GZMAP12544 262 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 ADSSP30520 456 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 GTF2H1P32780 548 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 TRADDQ15628 312 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 DALRD3Q5D0E6 543 aaKnown RBP19.15■□□□□ 0.66
SCARB1-208ENST00000544327 FAM102BQ5T8I3 360 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 DCAF12L1Q5VU92 463 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 PLA2G4FQ68DD2 849 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 ANO5Q75V66 913 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 SCYL3Q8IZE3 742 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 ZSWIM2Q8NEG5 633 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 TMC2Q8TDI7 906 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 KIFAP3Q92845 792 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 ATG4CQ96DT6 458 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 AS3MTQ9HBK9 375 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 ADAMTS5Q9UNA0 930 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 COG5Q9UP83 839 aa19.15■□□□□ 0.66
SCARB1-208ENST00000544327 SCAF8Q9UPN6 1271 aaKnown RBP19.15■□□□□ 0.66
SCARB1-208ENST00000544327 RTN2O75298 545 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 PPFIA4O75335 1185 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 STBD1O95210 358 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 ITGA4P13612 1032 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 NPTX2P47972 431 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 GUCY2FP51841 1108 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 RTP1P59025 263 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 DMP1Q13316 513 aaPredicted RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 BAATQ14032 418 aaPredicted RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 PTPROQ16827 1216 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 NSMFQ6X4W1 530 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 OTUD6AQ7L8S5 288 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 SHC3Q92529 594 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 LRRC45Q96CN5 670 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 MFSD14AQ96MC6 490 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 DDX47Q9H0S4 455 aaKnown RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 TMEM8AQ9HCN3 771 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 NOCTQ9UK39 431 aaKnown RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 NFASCO94856 1347 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 COL11A1P12107 1806 aaPredicted RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 TESPA1A2RU30 521 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms