RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 RRM2BQ7LG56 351 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 DFFAO00273 331 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 ADORA2BP29275 332 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 RECQLP46063 649 aaPredicted RBP16.38■□□□□ 0.21
CHD4-210ENST00000544040 COBLL1Q53SF7 1204 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 DEPDC1Q5TB30 811 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 TBC1D9BQ66K14 1250 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 CYGBQ8WWM9 190 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 MYOM2P54296 1465 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 GFAPP14136 432 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 GPC3P51654 580 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 COASYQ13057 564 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 RABGAP1LQ5R372 815 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 THEM5Q8N1Q8 247 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 ARHGAP18Q8N392 663 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 INPP5DQ92835 1189 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 ASAP1Q9ULH1 1129 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 MEFVO15553 781 aaPredicted RBP16.38■□□□□ 0.21
CHD4-210ENST00000544040 KCNQ4P56696 695 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 HIF1AQ16665 826 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 OR6P1Q8NGX9 317 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 PCDHA6Q9UN73 950 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 PCDHA8Q9Y5H6 950 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 KRT17Q04695 432 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 PLD3Q8IV08 490 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 RAD54LQ92698 747 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 INTS2Q9H0H0 1204 aaKnown RBP16.38■□□□□ 0.21
CHD4-210ENST00000544040 ABCB11O95342 1321 aa16.38■□□□□ 0.21
CHD4-210ENST00000544040 CFAP73A6NFT4 308 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 ZNF185O15231 689 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 KRT8P05787 483 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 GNA15P30679 374 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 ACCSLQ4AC99 568 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 NPHS2Q9NP85 383 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 RNF123Q5XPI4 1314 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 CALB1P05937 261 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 DRAP1Q14919 205 aaPredicted RBP16.37■□□□□ 0.21
CHD4-210ENST00000544040 OXER1Q8TDS5 423 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 GCOM2Q9BZD3 368 aaPredicted RBP16.37■□□□□ 0.21
CHD4-210ENST00000544040 ZNF518AQ6AHZ1 1483 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 E2F8A0AVK6 867 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 TEX33O43247 280 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 LDHAP00338 332 aaKnown RBP16.37■□□□□ 0.21
CHD4-210ENST00000544040 KRT72Q14CN4 511 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 SP110Q9HB58 689 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 ATP6V0A4Q9HBG4 840 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 H0Y626 953 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 TRIM16O95361 564 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 COPB2P35606 906 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 MS4A14Q96JA4 679 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 ZNF568Q3ZCX4 644 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 THEMIS2Q5TEJ8 643 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 ARL6IP4Q66PJ3 421 aaKnown RBP16.37■□□□□ 0.21
CHD4-210ENST00000544040 PLEKHM3Q6ZWE6 761 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 RHPN2Q8IUC4 686 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 SH3GL3Q99963 347 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 TMEM260Q9NX78 707 aa16.37■□□□□ 0.21
CHD4-210ENST00000544040 MYO1GB0I1T2 1018 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 CCDC22O60826 627 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 HSPA9P38646 679 aaKnown RBP16.36■□□□□ 0.21
CHD4-210ENST00000544040 ARSEP51690 589 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 DHX35Q9H5Z1 703 aaKnown RBP16.36■□□□□ 0.21
CHD4-210ENST00000544040 AIPL1Q9NZN9 384 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 ARHGEF37A1IGU5 675 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 PRR23D1E9PI22 279 aaPredicted RBP16.36■□□□□ 0.21
CHD4-210ENST00000544040 AKAP10O43572 662 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 PRR23D2P0DMB1 279 aaPredicted RBP16.36■□□□□ 0.21
CHD4-210ENST00000544040 GJC2Q5T442 439 aaPredicted RBP16.36■□□□□ 0.21
CHD4-210ENST00000544040 SPATA21Q7Z572 469 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 GPR108Q9NPR9 543 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 SLC9A2Q9UBY0 812 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 AMACRQ9UHK6 382 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 ZMYM3Q14202 1370 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 CHRNA3P32297 505 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 ANKRD40Q6AI12 368 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 SARM1Q6SZW1 724 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 FAM180AQ6UWF9 173 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 GALNT4Q8N4A0 578 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 ENAHQ8N8S7 591 aaPredicted RBP16.36■□□□□ 0.21
CHD4-210ENST00000544040 ZNF555Q8NEP9 628 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 ZNF341Q9BYN7 854 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 TRIM45Q9H8W5 580 aaPredicted RBP16.36■□□□□ 0.21
CHD4-210ENST00000544040 IP6K2Q9UHH9 426 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 EFCAB14O75071 495 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 SDC4P31431 198 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 LRRC31Q6UY01 552 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 PBXIP1Q96AQ6 731 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 OSBPL3Q9H4L5 887 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 NEDD4P46934 1319 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 MYO1DO94832 1006 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 CYP2D6P10635 497 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 SERPINB10P48595 397 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 MTMR1Q13613 665 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 SLC10A5Q5PT55 438 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 SIK2Q9H0K1 926 aa16.36■□□□□ 0.21
CHD4-210ENST00000544040 MARCOQ9UEW3 520 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms