RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 SAAL1Q96ER3 474 aa18.53■□□□□ 0.56
PTPRO-209ENST00000543886 BICD1Q96G01 975 aa18.53■□□□□ 0.56
PTPRO-209ENST00000543886 KCNG1Q9UIX4 513 aa18.53■□□□□ 0.56
PTPRO-209ENST00000543886 MAFBQ9Y5Q3 323 aaPredicted RBP18.53■□□□□ 0.56
PTPRO-209ENST00000543886 PDE2AO00408 941 aaPredicted RBP18.52■□□□□ 0.56
PTPRO-209ENST00000543886 SLC25A27O95847 323 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 UBA1P22314 1058 aaKnown RBP18.52■□□□□ 0.56
PTPRO-209ENST00000543886 EDNRBP24530 442 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 EPHX2P34913 555 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 EPC2Q52LR7 807 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 C1orf220Q5T0J3 134 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 CBWD2Q8IUF1 395 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 U2AF1L4Q8WU68 220 aaKnown RBP18.52■□□□□ 0.56
PTPRO-209ENST00000543886 ZC3H15Q8WU90 426 aaKnown RBP18.52■□□□□ 0.56
PTPRO-209ENST00000543886 POMGNT1Q8WZA1 660 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 PSMB7Q99436 277 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 MPHOSPH6Q99547 160 aaKnown RBP18.52■□□□□ 0.56
PTPRO-209ENST00000543886 TLR10Q9BXR5 811 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 GPR88Q9GZN0 384 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 FAM53CQ9NYF3 392 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 NENFQ9UMX5 172 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 KCNH4Q9UQ05 1017 aa18.52■□□□□ 0.56
PTPRO-209ENST00000543886 DDX3XO00571 662 aaKnown RBP eCLIP18.51■□□□□ 0.55
PTPRO-209ENST00000543886 HNRNPDLO14979 420 aaKnown RBP18.51■□□□□ 0.55
PTPRO-209ENST00000543886 H2AFZP0C0S5 128 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 H2AFVQ71UI9 128 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 PLEKHO2Q8TD55 490 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 ZNF526Q8TF50 670 aaPredicted RBP18.51■□□□□ 0.55
PTPRO-209ENST00000543886 HNRNPLLQ8WVV9 542 aaKnown RBP18.51■□□□□ 0.55
PTPRO-209ENST00000543886 L3MBTL3Q96JM7 780 aaPredicted RBP18.51■□□□□ 0.55
PTPRO-209ENST00000543886 UBE2TQ9NPD8 197 aaPredicted RBP18.51■□□□□ 0.55
PTPRO-209ENST00000543886 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
PTPRO-209ENST00000543886 INTUQ9ULD6 942 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 ADGRA3Q8IWK6 1321 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 CNMDO75829 334 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 FTCDO95954 541 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 CXCR5P32302 372 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 COPB2P35606 906 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 NOP2P46087 812 aaKnown RBP18.51■□□□□ 0.55
PTPRO-209ENST00000543886 NEDD9Q14511 834 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 CCDC70Q6NSX1 233 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 USP37Q86T82 979 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 CCDC127Q96BQ5 260 aa18.51■□□□□ 0.55
PTPRO-209ENST00000543886 GRID2IPA4D2P6 1211 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 PMM2O15305 246 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 LRRN2O75325 713 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 FARP2O94887 1054 aaPredicted RBP18.5■□□□□ 0.55
PTPRO-209ENST00000543886 OSBPP22059 807 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 MCM3P25205 808 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 PAFAH1B1P43034 410 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 GABPB1Q06547 395 aaPredicted RBP18.5■□□□□ 0.55
PTPRO-209ENST00000543886 C2orf54Q08AI8 447 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 LONRF2Q1L5Z9 754 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 BRDTQ58F21 947 aaPredicted RBP18.5■□□□□ 0.55
PTPRO-209ENST00000543886 ZNF572Q7Z3I7 529 aaPredicted RBP18.5■□□□□ 0.55
PTPRO-209ENST00000543886 OPTNQ96CV9 577 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 TMEM117Q9H0C3 514 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 ARHGAP28Q9P2N2 729 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 LRRC37A2A6NM11 1700 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 TBC1D8O95759 1140 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 ATP4AP20648 1035 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 VSNL1P62760 191 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 KIF22Q14807 665 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 FAM160B1Q5W0V3 765 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 SLC39A4Q6P5W5 647 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 FASTKD5Q7L8L6 764 aaKnown RBP18.5■□□□□ 0.55
PTPRO-209ENST00000543886 ARMC9Q7Z3E5 817 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 GLYCTKQ8IVS8 523 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 LNX1Q8TBB1 728 aaPredicted RBP18.5■□□□□ 0.55
PTPRO-209ENST00000543886 SLC7A3Q8WY07 619 aa18.5■□□□□ 0.55
PTPRO-209ENST00000543886 IGKV6D-21A0A0A0MT36 114 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 TARSL2A2RTX5 802 aaKnown RBP18.49■□□□□ 0.55
PTPRO-209ENST00000543886 TGFB3P10600 412 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 GARTP22102 1010 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 MAP2K1Q02750 393 aaPredicted RBP18.49■□□□□ 0.55
PTPRO-209ENST00000543886 ITIH3Q06033 890 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 STRN3Q13033 797 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 MEI1Q5TIA1 1274 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 WDR93Q6P2C0 686 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 ARHGEF19Q8IW93 802 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 GPD1LQ8N335 351 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 SLC30A5Q8TAD4 765 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 TMC2Q8TDI7 906 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 TMEM143Q96AN5 459 aa18.49■□□□□ 0.55
PTPRO-209ENST00000543886 NIFKQ9BYG3 293 aaKnown RBP18.49■□□□□ 0.55
PTPRO-209ENST00000543886 FOXN3O00409 490 aaPredicted RBP18.48■□□□□ 0.55
PTPRO-209ENST00000543886 TNFAIP3P21580 790 aa18.48■□□□□ 0.55
PTPRO-209ENST00000543886 SCP2P22307 547 aa18.48■□□□□ 0.55
PTPRO-209ENST00000543886 LIG4P49917 911 aa18.48■□□□□ 0.55
PTPRO-209ENST00000543886 MCCD1P59942 119 aaPredicted RBP18.48■□□□□ 0.55
PTPRO-209ENST00000543886 KRT39Q6A163 491 aa18.48■□□□□ 0.55
PTPRO-209ENST00000543886 EEPD1Q7L9B9 569 aa18.48■□□□□ 0.55
PTPRO-209ENST00000543886 PARD3BQ8TEW8 1205 aa18.48■□□□□ 0.55
PTPRO-209ENST00000543886 FBXL18Q96ME1 805 aa18.48■□□□□ 0.55
PTPRO-209ENST00000543886 DHX33Q9H6R0 707 aaKnown RBP18.48■□□□□ 0.55
PTPRO-209ENST00000543886 TMEM8AQ9HCN3 771 aa18.48■□□□□ 0.55
PTPRO-209ENST00000543886 SEPT11Q9NVA2 429 aaKnown RBP18.48■□□□□ 0.55
PTPRO-209ENST00000543886 A0A0A6YYK5 440 aaPredicted RBP18.48■□□□□ 0.55
PTPRO-209ENST00000543886 GSTTP1A0A1W2PQM5 241 aa18.48■□□□□ 0.55
PTPRO-209ENST00000543886 RFC5P40937 340 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms