RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ZNF618Q5T7W0 954 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
DDB1-223ENST00000543658 APBB1IPQ7Z5R6 666 aaPredicted RBP13.05□□□□□ -0.32
DDB1-223ENST00000543658 MAP4K3Q8IVH8 894 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 ADSSL1Q8N142 457 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 GLIS3Q8NEA6 775 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 GOLGA5Q8TBA6 731 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 ZNF507Q8TCN5 953 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 SCFD1Q8WVM8 642 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 CTAGE1Q96RT6 745 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 FGFBP2Q9BYJ0 223 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 PPP1R12CQ9BZL4 782 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 GBP3Q9H0R5 595 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 IFT122Q9HBG6 1241 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 CITO14578 2027 aa13.05□□□□□ -0.32
DDB1-223ENST00000543658 BECN2A8MW95 431 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 GPR182O15218 404 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 PPP1R37O75864 691 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 PARNO95453 639 aaKnown RBP13.04□□□□□ -0.32
DDB1-223ENST00000543658 BMP6P22004 513 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 CCNE1P24864 410 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 TPM4P67936 248 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 PAK2Q13177 524 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 BMT2Q1RMZ1 405 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 FAM26DQ5JW98 314 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 ARMCX5Q6P1M9 558 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 C11orf57Q6ZUT1 292 aaPredicted RBP13.04□□□□□ -0.32
DDB1-223ENST00000543658 USP38Q8NB14 1042 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 P2RX5Q93086 422 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 ADPGKQ9BRR6 497 aa13.04□□□□□ -0.32
DDB1-223ENST00000543658 TYW1Q9NV66 732 aaKnown RBP13.04□□□□□ -0.32
DDB1-223ENST00000543658 CGNQ9P2M7 1197 aaKnown RBP13.04□□□□□ -0.32
DDB1-223ENST00000543658 SMTNL1A8MU46 457 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 PPP1R3GB7ZBB8 358 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 ACKR2O00590 384 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 N4BP3O15049 544 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 FGFR1OPO95684 399 aaKnown RBP13.03□□□□□ -0.32
DDB1-223ENST00000543658 CHRNA1P02708 482 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 GHRP10912 638 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 RAG1P15918 1043 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 ERCC5P28715 1186 aaPredicted RBP13.03□□□□□ -0.32
DDB1-223ENST00000543658 AXLP30530 894 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 STX17P56962 302 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 SNRPFP62306 86 aaKnown RBP13.03□□□□□ -0.32
DDB1-223ENST00000543658 LRRC63Q05C16 580 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
DDB1-223ENST00000543658 HSP90AA2PQ14568 343 aaPredicted RBP13.03□□□□□ -0.32
DDB1-223ENST00000543658 FAM187BQ17R55 369 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 TSHZ1Q6ZSZ6 1077 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 KCNN1Q92952 543 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 TCHPQ9BT92 498 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 FUCA2Q9BTY2 467 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 NOC4LQ9BVI4 516 aaKnown RBP13.03□□□□□ -0.32
DDB1-223ENST00000543658 CCDC113Q9H0I3 377 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 CDHR5Q9HBB8 845 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 ANKFY1Q9P2R3 1169 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 RWDD2AQ9UIY3 292 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 PIN4Q9Y237 131 aaKnown RBP13.03□□□□□ -0.32
DDB1-223ENST00000543658 SQORQ9Y6N5 450 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 CNTNAP2Q9UHC6 1331 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 RALGAPA2Q2PPJ7 1873 aa13.03□□□□□ -0.32
DDB1-223ENST00000543658 LTBP2Q14767 1821 aa13.02□□□□□ -0.32
DDB1-223ENST00000543658 MICAL3Q7RTP6 2002 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 GOLGA6L19H0YKK7 550 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 PDXKO00764 312 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 CSDE1O75534 798 aaKnown RBP13.02□□□□□ -0.33
DDB1-223ENST00000543658 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
DDB1-223ENST00000543658 ZSCAN20P17040 1043 aaPredicted RBP13.02□□□□□ -0.33
DDB1-223ENST00000543658 FGFR4P22455 802 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 RPL13P26373 211 aaKnown RBP13.02□□□□□ -0.33
DDB1-223ENST00000543658 ZNF165P49910 485 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 FBXO47Q5MNV8 452 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 ATF7IP2Q5U623 682 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 SLFN12LQ6IEE8 588 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 NOTUMQ6P988 496 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 ZPBP2Q6X784 338 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 TAS1R3Q7RTX0 852 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 UBE2Q1Q7Z7E8 422 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 C7orf61Q8IZ16 206 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.33
DDB1-223ENST00000543658 POMGNT1Q8WZA1 660 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 TARS2Q9BW92 718 aaKnown RBP13.02□□□□□ -0.33
DDB1-223ENST00000543658 STRA6Q9BX79 667 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 TRIM6Q9C030 488 aaPredicted RBP13.02□□□□□ -0.33
DDB1-223ENST00000543658 FZD8Q9H461 694 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 TBX21Q9UL17 535 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 NOC2LQ9Y3T9 749 aaKnown RBP13.02□□□□□ -0.33
DDB1-223ENST00000543658 ZMYM2Q9UBW7 1377 aa13.02□□□□□ -0.33
DDB1-223ENST00000543658 BRCA2P51587 3418 aa13.01□□□□□ -0.33
DDB1-223ENST00000543658 TRIM49BA6NDI0 452 aa13.01□□□□□ -0.33
DDB1-223ENST00000543658 CLDN3O15551 220 aa13.01□□□□□ -0.33
DDB1-223ENST00000543658 EVI5O60447 810 aa13.01□□□□□ -0.33
DDB1-223ENST00000543658 TSPAN1O60635 241 aa13.01□□□□□ -0.33
DDB1-223ENST00000543658 PIGRP01833 764 aa13.01□□□□□ -0.33
DDB1-223ENST00000543658 IQCF3P0C7M6 154 aa13.01□□□□□ -0.33
DDB1-223ENST00000543658 HARSP12081 509 aaKnown RBP13.01□□□□□ -0.33
DDB1-223ENST00000543658 CD52P31358 61 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms