RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ZBTB7AO95365 584 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 CSF1RP07333 972 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 EN1Q05925 392 aaPredicted RBP20.66■□□□□ 0.9
SUDS3-204ENST00000543473 NSMCE1Q8WV22 266 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 MAP3K14Q99558 947 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 ANLNQ9NQW6 1124 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 PLEKHG2Q9H7P9 1386 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L15C9J2P7 530 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L13C9JLJ4 530 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L11C9JVI0 530 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L18D6R9N7 530 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L22D6RA61 530 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L17D6RBQ6 530 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L19D6RCP7 530 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L20D6RJB6 530 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 PLEKP08567 350 aaPredicted RBP20.66■□□□□ 0.9
SUDS3-204ENST00000543473 HOXA13P31271 388 aaPredicted RBP20.66■□□□□ 0.9
SUDS3-204ENST00000543473 RANBP1P43487 201 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L24Q0WX57 530 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L6PQ6QN14 398 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 PIM2Q9P1W9 311 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 GOLGA8MH3BSY2 632 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 ORC4O43929 436 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 CRKP46108 304 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 ART3Q13508 389 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 PDZD4Q76G19 769 aaPredicted RBP20.66■□□□□ 0.9
SUDS3-204ENST00000543473 AGGF1Q8N302 714 aaeCLIP20.66■□□□□ 0.9
SUDS3-204ENST00000543473 INTS2Q9H0H0 1204 aaKnown RBP20.66■□□□□ 0.9
SUDS3-204ENST00000543473 KLHL38Q2WGJ6 581 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 FOXR1Q6PIV2 292 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 MDM1Q8TC05 714 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 ATP6V0A1Q93050 837 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 RNF25Q96BH1 459 aaPredicted RBP20.66■□□□□ 0.9
SUDS3-204ENST00000543473 DRC3Q9H069 523 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 CAPN6Q9Y6Q1 641 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 RFX5P48382 616 aaPredicted RBP20.65■□□□□ 0.9
SUDS3-204ENST00000543473 EPHB1P54762 984 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 KRT17Q04695 432 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 AP3B2Q13367 1082 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 STAT4Q14765 748 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 FOXP4Q8IVH2 680 aaPredicted RBP20.65■□□□□ 0.9
SUDS3-204ENST00000543473 XXYLT1Q8NBI6 393 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 LONRF1Q17RB8 773 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 JADE1Q6IE81 842 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 CEP170P1Q96L14 293 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 VCPKMTQ9H867 229 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 APOBEC2Q9Y235 224 aaKnown RBP20.65■□□□□ 0.9
SUDS3-204ENST00000543473 MROH1Q8NDA8 1641 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 CDH16O75309 829 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 UCHL3P15374 230 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 ZNF18P17022 549 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
SUDS3-204ENST00000543473 STAMBPL1Q96FJ0 436 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 CELF4Q9BZC1 486 aaKnown RBP20.65■□□□□ 0.9
SUDS3-204ENST00000543473 MST1RQ04912 1400 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 CRYMQ14894 314 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 IZUMO3Q5VZ72 239 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 CASKIN2Q8WXE0 1202 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 KCND1Q9NSA2 647 aa20.65■□□□□ 0.9
SUDS3-204ENST00000543473 ZBTB5O15062 677 aa20.64■□□□□ 0.9
SUDS3-204ENST00000543473 PRLRP16471 622 aa20.64■□□□□ 0.9
SUDS3-204ENST00000543473 SLC20A2Q08357 652 aa20.64■□□□□ 0.9
SUDS3-204ENST00000543473 TRMT10CQ7L0Y3 403 aaKnown RBP20.64■□□□□ 0.9
SUDS3-204ENST00000543473 C3orf20Q8ND61 904 aa20.64■□□□□ 0.9
SUDS3-204ENST00000543473 SLC35G2Q8TBE7 412 aa20.64■□□□□ 0.9
SUDS3-204ENST00000543473 OLFM3Q96PB7 478 aa20.64■□□□□ 0.9
SUDS3-204ENST00000543473 TDRD3Q9H7E2 651 aaKnown RBP20.64■□□□□ 0.9
SUDS3-204ENST00000543473 XAB2Q9HCS7 855 aaKnown RBP20.64■□□□□ 0.9
SUDS3-204ENST00000543473 TRIM49P0CI25 452 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 TRIM49CP0CI26 452 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 DEUP1Q05D60 604 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 EZH2Q15910 746 aaKnown RBP20.64■□□□□ 0.89
SUDS3-204ENST00000543473 CXorf38Q8TB03 319 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 TRIM56Q9BRZ2 755 aaKnown RBP20.64■□□□□ 0.89
SUDS3-204ENST00000543473 IGF2BP3O00425 579 aaKnown RBP eCLIP20.64■□□□□ 0.89
SUDS3-204ENST00000543473 LONP2Q86WA8 852 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 SDCCAG3Q96C92 435 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 ERP27Q96DN0 273 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 ECE2O60344 883 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 ANXA13P27216 316 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 SYDE2Q5VT97 1194 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 RGS9BPQ6ZS82 235 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 RFX8Q6ZV50 586 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 ZBED8Q8IZ13 594 aa20.64■□□□□ 0.89
SUDS3-204ENST00000543473 SEPT9Q9UHD8 586 aaPredicted RBP20.64■□□□□ 0.89
SUDS3-204ENST00000543473 PITPNM2Q9BZ72 1349 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 CD58P19256 250 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 USP11P51784 963 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 PDIA5Q14554 519 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 GOLPH3Q9H4A6 298 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 DCCP43146 1447 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 ZBTB17Q13105 803 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 PRR5LQ6MZQ0 368 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 JAMLQ86YT9 394 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 DTX3LQ8TDB6 740 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 ERP44Q9BS26 406 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 SENP1Q9P0U3 644 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 PHF2O75151 1096 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 KRT38O76015 456 aa20.63■□□□□ 0.89
SUDS3-204ENST00000543473 PEX3P56589 373 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms