RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 LRRN2O75325 713 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 POLR2MP0CAP2 368 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 HADHBP55084 474 aaKnown RBP17.92■□□□□ 0.46
KDM2B-216ENST00000543025 KCNV1Q6PIU1 500 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 ARMC9Q7Z3E5 817 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 ADAT2Q7Z6V5 191 aaKnown RBP17.92■□□□□ 0.46
KDM2B-216ENST00000543025 PALB2Q86YC2 1186 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 SYCP3Q8IZU3 236 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 WDR11Q9BZH6 1224 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 ERVK-5Q9HDB9 667 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 WRAP73Q9P2S5 460 aaPredicted RBP17.92■□□□□ 0.46
KDM2B-216ENST00000543025 COG5Q9UP83 839 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 SYNGAP1Q96PV0 1343 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 RBBP6Q7Z6E9 1792 aaKnown RBP17.92■□□□□ 0.46
KDM2B-216ENST00000543025 GUCY2CP25092 1073 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 CDR1P51861 262 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
KDM2B-216ENST00000543025 DRP2Q13474 957 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 AGPAT1Q99943 283 aa17.92■□□□□ 0.46
KDM2B-216ENST00000543025 DCDC2CA8MYV0 355 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 FOXN3O00409 490 aaPredicted RBP17.91■□□□□ 0.46
KDM2B-216ENST00000543025 VCAM1P19320 739 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 MYBPC2Q14324 1141 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 CEP55Q53EZ4 464 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 HOOK3Q86VS8 718 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 RDH13Q8NBN7 331 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 LMO3Q8TAP4 145 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 ALG3Q92685 438 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 HOOK2Q96ED9 719 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 ZNF577Q9BSK1 485 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 VCPKMTQ9H867 229 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 CNOT10Q9H9A5 744 aaKnown RBP17.91■□□□□ 0.46
KDM2B-216ENST00000543025 EHMT1Q9H9B1 1298 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 ZDHHC18Q9NUE0 388 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.91■□□□□ 0.46
KDM2B-216ENST00000543025 DDX20Q9UHI6 824 aaKnown RBP17.91■□□□□ 0.46
KDM2B-216ENST00000543025 RASAL2Q9UJF2 1139 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 MIF4GDA9UHW6 222 aaKnown RBP17.91■□□□□ 0.46
KDM2B-216ENST00000543025 KRT13P13646 458 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 MAPK7Q13164 816 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 PLCB4Q15147 1175 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 KIAA1755Q5JYT7 1200 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 C11orf63Q6NUN7 778 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 TLCD1Q96CP7 247 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 CABS1Q96KC9 395 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 CEP89Q96ST8 783 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 STRA6Q9BX79 667 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 UNC45AQ9H3U1 944 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 ALG6Q9Y672 507 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 PFASO15067 1338 aa17.91■□□□□ 0.46
KDM2B-216ENST00000543025 ENTPD3O75355 529 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 NUDT17P0C025 328 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 RPS12P25398 132 aaKnown RBP17.9■□□□□ 0.46
KDM2B-216ENST00000543025 COPB2P35606 906 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 GMPSP49915 693 aaPredicted RBP17.9■□□□□ 0.46
KDM2B-216ENST00000543025 DRG2P55039 364 aaKnown RBP17.9■□□□□ 0.46
KDM2B-216ENST00000543025 UBXN2AP68543 259 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 SETQ01105 290 aaPredicted RBP17.9■□□□□ 0.46
KDM2B-216ENST00000543025 PPARDQ03181 441 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 ACTN3Q08043 901 aaPredicted RBP17.9■□□□□ 0.46
KDM2B-216ENST00000543025 CETN1Q12798 172 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 JAMLQ86YT9 394 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 UBL4BQ8N7F7 174 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 RAPGEF5Q92565 580 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 VTI1AQ96AJ9 217 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 LXNQ9BS40 222 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 TMOD4Q9NZQ9 345 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 ARHGEF35A5YM69 484 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 C5orf60A6NFR6 353 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 HSPA6P17066 643 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 RRP1BQ14684 758 aaKnown RBP17.9■□□□□ 0.46
KDM2B-216ENST00000543025 INTS8Q75QN2 995 aaKnown RBP17.9■□□□□ 0.46
KDM2B-216ENST00000543025 OGFOD1Q8N543 542 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 GLG1Q92896 1179 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 PABPC3Q9H361 631 aaKnown RBP17.9■□□□□ 0.46
KDM2B-216ENST00000543025 TDRD3Q9H7E2 651 aaKnown RBP17.9■□□□□ 0.46
KDM2B-216ENST00000543025 GOPCQ9HD26 462 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 CTTNBP2NLQ9P2B4 639 aa17.9■□□□□ 0.46
KDM2B-216ENST00000543025 HIP1RO75146 1068 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 PHF2O75151 1096 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 PMS2P54278 862 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 CCDC121Q6ZUS5 278 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 BANK1Q8NDB2 785 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 NEK9Q8TD19 979 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 CSRNP1Q96S65 589 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 TEKT3Q9BXF9 490 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 ARHGEF10LQ9HCE6 1279 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 UBE2TQ9NPD8 197 aaPredicted RBP17.89■□□□□ 0.45
KDM2B-216ENST00000543025 FAM170AA1A519 330 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 K7ENM7 598 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 CHRNA3P32297 505 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 ECE1P42892 770 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 TCEAL1Q15170 157 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 QPCTQ16769 361 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 SWT1Q5T5J6 900 aaKnown RBP17.89■□□□□ 0.45
KDM2B-216ENST00000543025 SLC20A1Q8WUM9 679 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 LRRC4CQ9HCJ2 640 aa17.89■□□□□ 0.45
KDM2B-216ENST00000543025 SMCHD1A6NHR9 2005 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 EMSYQ7Z589 1322 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 KIAA0391O15091 583 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms