RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 EPHB4P54760 987 aa22.88■■□□□ 1.25
OTUB1-211ENST00000543004 PAK2Q13177 524 aa22.88■■□□□ 1.25
OTUB1-211ENST00000543004 MAPK6Q16659 721 aa22.88■■□□□ 1.25
OTUB1-211ENST00000543004 PLEKHG4Q58EX7 1191 aa22.88■■□□□ 1.25
OTUB1-211ENST00000543004 TMEM199Q8N511 208 aa22.88■■□□□ 1.25
OTUB1-211ENST00000543004 SCFD1Q8WVM8 642 aa22.88■■□□□ 1.25
OTUB1-211ENST00000543004 ST6GALNAC4Q9H4F1 302 aa22.88■■□□□ 1.25
OTUB1-211ENST00000543004 TMEM134Q9H6X4 195 aa22.88■■□□□ 1.25
OTUB1-211ENST00000543004 SFPQP23246 707 aaKnown RBP eCLIP22.87■■□□□ 1.25
OTUB1-211ENST00000543004 PSMD2Q13200 908 aa22.87■■□□□ 1.25
OTUB1-211ENST00000543004 MORC3Q14149 939 aa22.87■■□□□ 1.25
OTUB1-211ENST00000543004 RBM43Q6ZSC3 357 aaKnown RBP22.87■■□□□ 1.25
OTUB1-211ENST00000543004 C16orf59Q7L2K0 433 aa22.87■■□□□ 1.25
OTUB1-211ENST00000543004 CCDC47Q96A33 483 aaKnown RBP22.87■■□□□ 1.25
OTUB1-211ENST00000543004 RMND1Q9NWS8 449 aa22.87■■□□□ 1.25
OTUB1-211ENST00000543004 KCNG1Q9UIX4 513 aa22.87■■□□□ 1.25
OTUB1-211ENST00000543004 NR2E3Q9Y5X4 410 aa22.87■■□□□ 1.25
OTUB1-211ENST00000543004 SQORQ9Y6N5 450 aa22.87■■□□□ 1.25
OTUB1-211ENST00000543004 LAMA2P24043 3122 aaKnown RBP22.87■■□□□ 1.25
OTUB1-211ENST00000543004 PDE4DIPQ5VU43 2346 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 TISP43B9A030 160 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 ACKR2O00590 384 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 ERLIN2O94905 339 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 ARF4P18085 180 aaPredicted RBP22.86■■□□□ 1.25
OTUB1-211ENST00000543004 HOXA11P31270 313 aaPredicted RBP22.86■■□□□ 1.25
OTUB1-211ENST00000543004 SKOR2Q2VWA4 1001 aaPredicted RBP22.86■■□□□ 1.25
OTUB1-211ENST00000543004 NELFCDQ8IXH7 590 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 USP38Q8NB14 1042 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 TARS2Q9BW92 718 aaKnown RBP22.86■■□□□ 1.25
OTUB1-211ENST00000543004 PRMT7Q9NVM4 692 aaPredicted RBP22.86■■□□□ 1.25
OTUB1-211ENST00000543004 GPR182O15218 404 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 MGEA5O60502 916 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 FPGSQ05932 587 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 PRPF4BQ13523 1007 aaKnown RBP22.86■■□□□ 1.25
OTUB1-211ENST00000543004 FAM187BQ17R55 369 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 ZNF658Q5TYW1 1059 aaPredicted RBP22.86■■□□□ 1.25
OTUB1-211ENST00000543004 PPP4R3CPQ6ZMV5 832 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 AGPAT5Q9NUQ2 364 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 PIN4Q9Y237 131 aaKnown RBP22.86■■□□□ 1.25
OTUB1-211ENST00000543004 PCDHB13Q9Y5F0 798 aa22.86■■□□□ 1.25
OTUB1-211ENST00000543004 RANBP2P49792 3224 aaKnown RBP22.86■■□□□ 1.25
OTUB1-211ENST00000543004 ZMYM2Q9UBW7 1377 aa22.85■■□□□ 1.25
OTUB1-211ENST00000543004 MICAL3Q7RTP6 2002 aa22.85■■□□□ 1.25
OTUB1-211ENST00000543004 H0YCG3 227 aa22.85■■□□□ 1.25
OTUB1-211ENST00000543004 RFC2P35250 354 aa22.85■■□□□ 1.25
OTUB1-211ENST00000543004 STRN3Q13033 797 aa22.85■■□□□ 1.25
OTUB1-211ENST00000543004 L1TD1Q5T7N2 865 aaKnown RBP22.85■■□□□ 1.25
OTUB1-211ENST00000543004 MAP4K3Q8IVH8 894 aa22.85■■□□□ 1.25
OTUB1-211ENST00000543004 SLC17A8Q8NDX2 589 aa22.85■■□□□ 1.25
OTUB1-211ENST00000543004 ZNF507Q8TCN5 953 aa22.85■■□□□ 1.25
OTUB1-211ENST00000543004 KCNN1Q92952 543 aa22.85■■□□□ 1.25
OTUB1-211ENST00000543004 PARNO95453 639 aaKnown RBP22.84■■□□□ 1.25
OTUB1-211ENST00000543004 CD44P16070 742 aaKnown RBP22.84■■□□□ 1.25
OTUB1-211ENST00000543004 PRCPP42785 496 aa22.84■■□□□ 1.25
OTUB1-211ENST00000543004 EEF1DP3Q658K8 133 aa22.84■■□□□ 1.25
OTUB1-211ENST00000543004 SLC39A4Q6P5W5 647 aa22.84■■□□□ 1.25
OTUB1-211ENST00000543004 RTN4RL1Q86UN2 441 aaPredicted RBP22.84■■□□□ 1.25
OTUB1-211ENST00000543004 LINC01599Q8WXQ3 324 aa22.84■■□□□ 1.25
OTUB1-211ENST00000543004 ZBTB45Q96K62 511 aaPredicted RBP22.84■■□□□ 1.25
OTUB1-211ENST00000543004 IL23AQ9NPF7 189 aa22.84■■□□□ 1.25
OTUB1-211ENST00000543004 CNTNAP2Q9UHC6 1331 aa22.84■■□□□ 1.25
OTUB1-211ENST00000543004 ANKRD63C9JTQ0 380 aa22.83■■□□□ 1.25
OTUB1-211ENST00000543004 H0YGN5 161 aa22.83■■□□□ 1.25
OTUB1-211ENST00000543004 EIF3DO15371 548 aaKnown RBP eCLIP22.83■■□□□ 1.25
OTUB1-211ENST00000543004 SEPT8Q92599 483 aa22.83■■□□□ 1.25
OTUB1-211ENST00000543004 SYAP1Q96A49 352 aaPredicted RBP22.83■■□□□ 1.25
OTUB1-211ENST00000543004 PRIMPOLQ96LW4 560 aa22.83■■□□□ 1.25
OTUB1-211ENST00000543004 ACO2Q99798 780 aaKnown RBP22.83■■□□□ 1.25
OTUB1-211ENST00000543004 MRPL4Q9BYD3 311 aaKnown RBP22.83■■□□□ 1.25
OTUB1-211ENST00000543004 MAGEA10P43363 369 aaPredicted RBP22.82■■□□□ 1.24
OTUB1-211ENST00000543004 TMEM132AQ24JP5 1023 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 MYOCDQ8IZQ8 938 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 BICD1Q96G01 975 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 ACCSQ96QU6 501 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 LBHD1Q9BQE6 289 aaPredicted RBP22.82■■□□□ 1.24
OTUB1-211ENST00000543004 HAPLN2Q9GZV7 340 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 PDZD7Q9H5P4 517 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 HNRNPDLO14979 420 aaKnown RBP22.82■■□□□ 1.24
OTUB1-211ENST00000543004 PPIGQ13427 754 aaKnown RBP eCLIP22.82■■□□□ 1.249e-7■■■□□ 14.8
OTUB1-211ENST00000543004 ALCAMQ13740 583 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 DSC3Q14574 896 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 BMT2Q1RMZ1 405 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 ATF7IP2Q5U623 682 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 HVCN1Q96D96 273 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 ADAM2Q99965 735 aa22.82■■□□□ 1.24
OTUB1-211ENST00000543004 EIF2AQ9BY44 585 aaKnown RBP22.82■■□□□ 1.24
OTUB1-211ENST00000543004 A0A1B0GUA9 196 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 TGFB1I1O43294 461 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 IBSPP21815 317 aaPredicted RBP22.81■■□□□ 1.24
OTUB1-211ENST00000543004 PCBP1Q15365 356 aaKnown RBP eCLIP22.81■■□□□ 1.242e-10■■■■□ 25.6
OTUB1-211ENST00000543004 DPCR1Q3MIW9 517 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 UBXN11Q5T124 520 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 CNKSR3Q6P9H4 555 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 STXBP4Q6ZWJ1 553 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 ZNF365Q70YC5 407 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 OTOP2Q7RTS6 562 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 RPUSD2Q8IZ73 545 aaKnown RBP22.81■■□□□ 1.24
OTUB1-211ENST00000543004 SYCP3Q8IZU3 236 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 TRIML1Q8N9V2 468 aa22.81■■□□□ 1.24
OTUB1-211ENST00000543004 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.81■■□□□ 1.242e-8■□□□□ 9.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms