RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 PLA2G4FQ68DD2 849 aa19.99■□□□□ 0.79
CLSTN3-214ENST00000542663 ERMP1Q7Z2K6 904 aa19.99■□□□□ 0.79
CLSTN3-214ENST00000542663 MRPL10Q7Z7H8 261 aaKnown RBP19.99■□□□□ 0.79
CLSTN3-214ENST00000542663 FBXL16Q8N461 479 aa19.99■□□□□ 0.79
CLSTN3-214ENST00000542663 ETNPPLQ8TBG4 499 aa19.99■□□□□ 0.79
CLSTN3-214ENST00000542663 PGBD4Q96DM1 585 aa19.99■□□□□ 0.79
CLSTN3-214ENST00000542663 RTP3Q9BQQ7 232 aa19.99■□□□□ 0.79
CLSTN3-214ENST00000542663 MINDY3Q9H8M7 445 aa19.99■□□□□ 0.79
CLSTN3-214ENST00000542663 CACNA1AO00555 2505 aa19.99■□□□□ 0.79
CLSTN3-214ENST00000542663 DDX11L8A8MPP1 907 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 NRP1O14786 923 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 IFNAR1P17181 557 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 ID4P47928 161 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 UBXN11Q5T124 520 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 CMASQ8NFW8 434 aaPredicted RBP19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 URGCPQ8TCY9 931 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 RSAD2Q8WXG1 361 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 JAKMIP1Q96N16 626 aaKnown RBP19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 MBOAT7Q96N66 472 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 TMEM175Q9BSA9 504 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 RSAD1Q9HA92 442 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 MAN1C1Q9NR34 630 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 SH3GLB2Q9NR46 395 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 MRPL17Q9NRX2 175 aaKnown RBP19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 MARCH5Q9NX47 278 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 IGSF9Q9P2J2 1179 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 FBXL21Q9UKT6 434 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 DNAH14Q0VDD8 3507 aa19.98■□□□□ 0.79
CLSTN3-214ENST00000542663 PATJQ8NI35 1801 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 KRBA1A5PL33 1030 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 M0R2N6 131 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 EFEMP2O95967 443 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 ALDH2P05091 517 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 HOXA11P31270 313 aaPredicted RBP19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 TAS1R1Q7RTX1 841 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 ZNF579Q8NAF0 562 aaKnown RBP19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 NCOA5Q9HCD5 579 aaKnown RBP19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 STK39Q9UEW8 545 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 FAN1Q9Y2M0 1017 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 COL4A3BPQ9Y5P4 624 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 SNX14Q9Y5W7 946 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 CNTNAP2Q9UHC6 1331 aa19.97■□□□□ 0.79
CLSTN3-214ENST00000542663 EML1O00423 815 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 C2CD2LO14523 706 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 POMCP01189 267 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 SOD2P04179 222 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 NPEPPSP55786 919 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 NLRP5P59047 1200 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 PSMC5P62195 406 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 RNF168Q8IYW5 571 aaPredicted RBP19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 HERC2P3Q9BVR0 1158 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 WDR6Q9NNW5 1121 aaKnown RBP19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 KANSL3Q9P2N6 904 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 PCDHA4Q9UN74 947 aa19.96■□□□□ 0.79
CLSTN3-214ENST00000542663 CCDC195A0A1B0GUA6 201 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 TEX28O15482 410 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 CFHP08603 1231 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 RPS6KB1P23443 525 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 PDIA3P30101 505 aaKnown RBP19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 CCT2P78371 535 aaKnown RBP19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 NPY5RQ15761 445 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 BLOC1S2Q6QNY1 142 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 SMG8Q8ND04 991 aaKnown RBP19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 FAM193BQ96PV7 902 aaPredicted RBP19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 RPS6KC1Q96S38 1066 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 RHOBTB2Q9BYZ6 727 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 WRAP73Q9P2S5 460 aaPredicted RBP19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 WNT16Q9UBV4 365 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 CLUHO75153 1309 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 CACNA1IQ9P0X4 2223 aa19.95■□□□□ 0.78
CLSTN3-214ENST00000542663 COL4A3Q01955 1670 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 EP300Q09472 2414 aaPredicted RBP19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 INPPL1O15357 1258 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 CDC45O75419 566 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 RFPL2O75678 378 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 PAPLNO95428 1278 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 URODP06132 367 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 NCLP19338 710 aaKnown RBP19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 GBP2P32456 591 aaPredicted RBP19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 AK2P54819 239 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 EVCP57679 992 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 KIAA0319Q5VV43 1072 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 MOXD1Q6UVY6 613 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 SRGAP1Q7Z6B7 1085 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 COLGALT2Q8IYK4 626 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 PRPF31Q8WWY3 499 aaKnown RBP19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 MYADMQ96S97 322 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 JPH2Q9BR39 696 aaPredicted RBP19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 C22orf23Q9BZE7 217 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 DHX33Q9H6R0 707 aaKnown RBP19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 EPS15L1Q9UBC2 864 aa19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 PRG3Q9Y2Y8 225 aaPredicted RBP19.94■□□□□ 0.78
CLSTN3-214ENST00000542663 F8W810 466 aa19.93■□□□□ 0.78
CLSTN3-214ENST00000542663 SLC37A4O43826 429 aa19.93■□□□□ 0.78
CLSTN3-214ENST00000542663 ADH1AP07327 375 aa19.93■□□□□ 0.78
CLSTN3-214ENST00000542663 SRGAP2CP0DJJ0 459 aa19.93■□□□□ 0.78
CLSTN3-214ENST00000542663 MYBP10242 640 aa19.93■□□□□ 0.78
CLSTN3-214ENST00000542663 HSPA4P34932 840 aa19.93■□□□□ 0.78
CLSTN3-214ENST00000542663 BLIDQ8IZY5 108 aa19.93■□□□□ 0.78
CLSTN3-214ENST00000542663 SLC44A3Q8N4M1 653 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms