RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 CYP39A1Q9NYL5 469 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 RASAL2Q9UJF2 1139 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 ANAPC7Q9UJX3 599 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 ZNF148Q9UQR1 794 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 MYH14Q7Z406 1995 aaKnown RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 GRAP2O75791 330 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 OATP04181 439 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 PHKA2P46019 1235 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 GYS2P54840 703 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 FKBP1AP62942 108 aaKnown RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 SRGAP1Q7Z6B7 1085 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 CEP57Q86XR8 500 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 GPD1LQ8N335 351 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 FBXL13Q8NEE6 735 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 IPO4Q8TEX9 1081 aaKnown RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 CPB2Q96IY4 423 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 PARD6BQ9BYG5 372 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 ADAM22Q9P0K1 906 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 SEL1LQ9UBV2 794 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 CNOT8Q9UFF9 292 aaKnown RBP10.93□□□□□ -0.66
TOP3A-208ENST00000542570 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
TOP3A-208ENST00000542570 DOT1LQ8TEK3 1739 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 UPP2O95045 317 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 P4HA1P13674 534 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 ZNF720Q7Z2F6 126 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 MRPL4Q9BYD3 311 aaKnown RBP10.92□□□□□ -0.66
TOP3A-208ENST00000542570 PORCNQ9H237 461 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 UTP11Q9Y3A2 253 aaKnown RBP10.92□□□□□ -0.66
TOP3A-208ENST00000542570 A0A087X0T9 212 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 FAM228BP0C875 321 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 KCNA4P22459 653 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 TNFAIP2Q03169 654 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 ITGB3BPQ13352 177 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-208ENST00000542570 RNF187Q5TA31 235 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-208ENST00000542570 PCNX4Q63HM2 1172 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 CENPPQ6IPU0 288 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 CCDC170Q8IYT3 715 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 OTUD6BQ8N6M0 293 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 RNF25Q96BH1 459 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-208ENST00000542570 PACSIN1Q9BY11 444 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 SMARCAD1Q9H4L7 1026 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 TSKSQ9UJT2 592 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 AGAP1Q9UPQ3 857 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 BAZ2AQ9UIF9 1905 aaKnown RBP10.92□□□□□ -0.66
TOP3A-208ENST00000542570 KDM3BQ7LBC6 1761 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 FOXN3O00409 490 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-208ENST00000542570 SNHG28P0DPA3 235 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 CYP2C9P11712 490 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 CAPN2P17655 700 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 RGS7P49802 495 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 HP1BP3Q5SSJ5 553 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-208ENST00000542570 SYCP2LQ5T4T6 812 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 SLFN12LQ6IEE8 588 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 PDXDC1Q6P996 788 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 TBX20Q9UMR3 447 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 SNX9Q9Y5X1 595 aa10.92□□□□□ -0.66
TOP3A-208ENST00000542570 KIAA0100Q14667 2235 aaKnown RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 A0A087WZ62 844 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 LRRD1A4D1F6 860 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 STAM2O75886 525 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 SLC25A27O95847 323 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 FGGP02679 453 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 TCP1P17987 556 aaKnown RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 PPP6R3Q5H9R7 873 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 VSIG10LQ86VR7 867 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 SYCE1Q8N0S2 351 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 TCP11Q8WWU5 503 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 FAM167AQ96KS9 214 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 FDXACB1Q9BRP7 624 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 SEPT10Q9P0V9 454 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 IKBKGQ9Y6K9 419 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 EPHB6O15197 1021 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 GH1P01241 217 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 SPATA31C1P0DKV0 1188 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 INSRRP14616 1297 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 KCNA3P22001 575 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 ADCY8P40145 1251 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 ATP1A2P50993 1020 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 ALDH5A1P51649 535 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 GTF2A2P52657 109 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 ATN1P54259 1190 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 PLTPP55058 493 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 ERVK-9P63128 1117 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 MRPS9P82933 396 aaKnown RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 Q4G0T1 1027 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 CASC4Q6P4E1 433 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 FBXO38Q6PIJ6 1188 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 LENG1Q96BZ8 264 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 INTS13Q9NVM9 706 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 ODF2LQ9ULJ1 636 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 PI4K2BG5E9Z4 385 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 RNF225M0QZC1 329 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 KLRC4O43908 158 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 HEXIM1O94992 359 aaKnown RBP10.91□□□□□ -0.66
TOP3A-208ENST00000542570 SUPT20HL2P0C7V6 817 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 ADORA2BP29275 332 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 GPC3P51654 580 aa10.91□□□□□ -0.66
TOP3A-208ENST00000542570 ARMCX2Q7L311 632 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms