RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CCDC83Q8IWF9 413 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 MRPL43Q8N983 215 aaKnown RBP17.4■□□□□ 0.38
VPS33A-206ENST00000542310 PHF7Q9BWX1 381 aaPredicted RBP17.4■□□□□ 0.38
VPS33A-206ENST00000542310 ZBP1Q9H171 429 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 NRDE2Q9H7Z3 1164 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 RSAD1Q9HA92 442 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 TUFT1Q9NNX1 390 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 UBN1Q9NPG3 1134 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 IRAK3Q9Y616 596 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 ZMYM2Q9UBW7 1377 aa17.4■□□□□ 0.38
VPS33A-206ENST00000542310 C2orf71A6NGG8 1288 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 POTEMA6NI47 508 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 MEIS3P2A8K0S8 358 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 ZBTB39O15060 712 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 INPPL1O15357 1258 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 PLA2G5P39877 138 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 RNASELQ05823 741 aaKnown RBP17.39■□□□□ 0.37
VPS33A-206ENST00000542310 UBXN11Q5T124 520 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 NOTUMQ6P988 496 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 AGMOQ6ZNB7 445 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 DDX53Q86TM3 631 aaKnown RBP17.39■□□□□ 0.37
VPS33A-206ENST00000542310 IGSF21Q96ID5 467 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 TMEM175Q9BSA9 504 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 TMEM60Q9H2L4 133 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 KANSL3Q9P2N6 904 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 RAPGEFL1Q9UHV5 662 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 INPP5FQ9Y2H2 1132 aa17.39■□□□□ 0.37
VPS33A-206ENST00000542310 DENND4AQ7Z401 1863 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 TSPAN1O60635 241 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 GALTP07902 379 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 CTSAP10619 480 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 MCM7P33993 719 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 ARL2P36404 184 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 TECP42680 631 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 TRAPPC10P48553 1259 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 RBM10P98175 930 aaKnown RBP17.38■□□□□ 0.37
VPS33A-206ENST00000542310 NCBP1Q09161 790 aaKnown RBP17.38■□□□□ 0.37
VPS33A-206ENST00000542310 CAPSQ13938 189 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 TMEM173Q86WV6 379 aaPredicted RBP17.38■□□□□ 0.37
VPS33A-206ENST00000542310 RNF135Q8IUD6 432 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 FBXO18Q8NFZ0 1043 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 S1PR5Q9H228 398 aa17.38■□□□□ 0.37
VPS33A-206ENST00000542310 DBR1Q9UK59 544 aaKnown RBP17.38■□□□□ 0.37
VPS33A-206ENST00000542310 NT5C1B-RDH14C9J2C7 533 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 OR52Z1P0C646 297 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 MUTP22033 750 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 MBTD1Q05BQ5 628 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 TPRNQ4KMQ1 711 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 SYCE2Q6PIF2 218 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 VPS52Q8N1B4 723 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 MCPH1Q8NEM0 835 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 ERMNQ8TAM6 284 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 ASAP3Q8TDY4 903 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 KIF2CQ99661 725 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 POLR3CQ9BUI4 534 aaPredicted RBP17.37■□□□□ 0.37
VPS33A-206ENST00000542310 DZANK1Q9NVP4 752 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 MUTYHQ9UIF7 546 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 HCFC2Q9Y5Z7 792 aa17.37■□□□□ 0.37
VPS33A-206ENST00000542310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.36■□□□□ 0.37
VPS33A-206ENST00000542310 INO80B-WBP1J3KQ70 363 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 USO1O60763 962 aaKnown RBP17.36■□□□□ 0.37
VPS33A-206ENST00000542310 CLASP2O75122 1294 aaKnown RBP17.36■□□□□ 0.37
VPS33A-206ENST00000542310 SPATA31C1P0DKV0 1188 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 GLRA2P23416 452 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 SLC11A1P49279 550 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 RBM25P49756 843 aaKnown RBP17.36■□□□□ 0.37
VPS33A-206ENST00000542310 GUCY1B3Q02153 619 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 AMHR2Q16671 573 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 HAUS3Q68CZ6 603 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 NOSTRINQ8IVI9 506 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 HACE1Q8IYU2 909 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 FAM184AQ8NB25 1140 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 SMG8Q8ND04 991 aaKnown RBP17.36■□□□□ 0.37
VPS33A-206ENST00000542310 PIGOQ8TEQ8 1089 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 PRIMPOLQ96LW4 560 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 CSRNP2Q9H175 543 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 POLR3FQ9H1D9 316 aaPredicted RBP17.36■□□□□ 0.37
VPS33A-206ENST00000542310 DNAJB4Q9UDY4 337 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 IPPQ9Y573 584 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 TECTAO75443 2155 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 ZNF318Q5VUA4 2279 aa17.36■□□□□ 0.37
VPS33A-206ENST00000542310 ITGA4P13612 1032 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 RPA1P27694 616 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 ITIH3Q06033 890 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 TTC38Q5R3I4 469 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 CDCA2Q69YH5 1023 aaPredicted RBP17.35■□□□□ 0.37
VPS33A-206ENST00000542310 LLGL2Q6P1M3 1020 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 CATSPER3Q86XQ3 398 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 BCL7CQ8WUZ0 217 aaPredicted RBP17.35■□□□□ 0.37
VPS33A-206ENST00000542310 FAM122AQ96E09 287 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 NECTIN4Q96NY8 510 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 FAM193BQ96PV7 902 aaPredicted RBP17.35■□□□□ 0.37
VPS33A-206ENST00000542310 NACC1Q96RE7 527 aa17.35■□□□□ 0.37
VPS33A-206ENST00000542310 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
VPS33A-206ENST00000542310 NOL7Q9UMY1 257 aaKnown RBP17.35■□□□□ 0.37
VPS33A-206ENST00000542310 B4GALT3O60512 393 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 MED24O75448 989 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms