RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 GCN1Q92616 2671 aaKnown RBP8.74□□□□□ -1.01
NPIPB4-215ENST00000542133 GPR182O15218 404 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 LAMTOR5O43504 91 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 CTSAP10619 480 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 VAMP1P23763 118 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 GBP2P32456 591 aaPredicted RBP8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 MAN1A1P33908 653 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 METAP2P50579 478 aaKnown RBP eCLIP8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 SATB1Q01826 763 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 BIRC2Q13490 618 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 GIT2Q14161 759 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 BMS1Q14692 1282 aaKnown RBP8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 SLC35G1Q2M3R5 365 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 CLLU1OSQ5K130 101 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 ODR4Q5SWX8 454 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 PCNX4Q63HM2 1172 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 DCLRE1AQ6PJP8 1040 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 NLRX1Q86UT6 975 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 IQCA1Q86XH1 822 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 HOMER1Q86YM7 354 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 ABI1Q8IZP0 508 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 VPS52Q8N1B4 723 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 ENAHQ8N8S7 591 aaPredicted RBP8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 TMEM87AQ8NBN3 555 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 NELL1Q92832 810 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 TMEM169Q96HH4 297 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 RNF41Q9H4P4 317 aaPredicted RBP8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 SLC2A4RGQ9NR83 387 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 SPATA6Q9NWH7 488 aaPredicted RBP8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 ZSCAN32Q9NX65 697 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 GMEB2Q9UKD1 530 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 SCINQ9Y6U3 715 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 CLUHO75153 1309 aa8.73□□□□□ -1.01
NPIPB4-215ENST00000542133 A0A0D9SFI3 127 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 NT5C1B-RDH14C9J2C7 533 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 KLRF2D3W0D1 207 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 TBC1D4O60343 1298 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 PROS1P07225 676 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 POLGP54098 1239 aaPredicted RBP8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 BCAR1P56945 870 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 STARD6P59095 220 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 SHC2P98077 582 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 CSTF1Q05048 431 aaKnown RBP8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 WTAPQ15007 396 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 PTPN14Q15678 1187 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 CCDC178Q5BJE1 867 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 SDE2Q6IQ49 451 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 MTHFD1LQ6UB35 978 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 PPFIBP1Q86W92 1011 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 C1orf131Q8NDD1 294 aaKnown RBP8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 OTUD7AQ8TE49 926 aaPredicted RBP8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 NXPE3Q969Y0 559 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 GPRASP2Q96D09 838 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 SPACA7Q96KW9 195 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 CEP63Q96MT8 703 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 PIGSQ96S52 555 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 MYADMQ96S97 322 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 ZSCAN10Q96SZ4 725 aaPredicted RBP8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 PAIP2Q9BPZ3 127 aaKnown RBP8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 SLC4A5Q9BY07 1137 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 BCO2Q9BYV7 579 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 WDR6Q9NNW5 1121 aaKnown RBP8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 HELLSQ9NRZ9 838 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 CUEDC1Q9NWM3 386 aaPredicted RBP8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 PKD2L1Q9P0L9 805 aa8.72□□□□□ -1.01
NPIPB4-215ENST00000542133 MS4A1P11836 297 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 NT5C2P49902 561 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 CLCN4P51793 760 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 SPEM2Q0P670 501 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 TRAF1Q13077 416 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 HTR4Q13639 388 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 ZNF589Q86UQ0 364 aaPredicted RBP8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 PDILTQ8N807 584 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 CMASQ8NFW8 434 aaPredicted RBP8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 HELQQ8TDG4 1101 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 BCL7CQ8WUZ0 217 aaPredicted RBP8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 STAMQ92783 540 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 TNPO1Q92973 898 aaKnown RBP8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 CDHR1Q96JP9 859 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 FAM227BQ96M60 508 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 FAM210AQ96ND0 272 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 RPS6KC1Q96S38 1066 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 MYCBPQ99417 103 aaPredicted RBP8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 OSMRQ99650 979 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 DDX23Q9BUQ8 820 aaKnown RBP8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 MRPL9Q9BYD2 267 aaKnown RBP8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 AZI2Q9H6S1 392 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 MAD2L2Q9UI95 211 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 MYH15Q9Y2K3 1946 aa8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 FLNBO75369 2602 aaKnown RBP8.71□□□□□ -1.02
NPIPB4-215ENST00000542133 KANSL1LA0AUZ9 987 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 CCDC189A1A4V9 331 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 PALM3A6NDB9 673 aaPredicted RBP8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 SOBPA7XYQ1 873 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 ANHXE9PGG2 379 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 ITGB5P18084 799 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 ALDH7A1P49419 539 aaKnown RBP8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 KIZQ2M2Z5 673 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms