RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 UBE2TQ9NPD8 197 aaPredicted RBP16.52■□□□□ 0.24
CNOT9-208ENST00000542068 SAMD15Q9P1V8 674 aa16.52■□□□□ 0.24
CNOT9-208ENST00000542068 PCNTO95613 3336 aa16.52■□□□□ 0.24
CNOT9-208ENST00000542068 SPATA31A6Q5VVP1 1343 aa16.52■□□□□ 0.24
CNOT9-208ENST00000542068 DDX3YO15523 660 aaKnown RBP16.52■□□□□ 0.23
CNOT9-208ENST00000542068 ARP10275 920 aa16.52■□□□□ 0.23
CNOT9-208ENST00000542068 EZRP15311 586 aaKnown RBP16.52■□□□□ 0.23
CNOT9-208ENST00000542068 CREB1P16220 341 aa16.52■□□□□ 0.23
CNOT9-208ENST00000542068 RPL21P46778 160 aaKnown RBP16.52■□□□□ 0.23
CNOT9-208ENST00000542068 CLNS1AP54105 237 aaKnown RBP16.52■□□□□ 0.23
CNOT9-208ENST00000542068 AP3B2Q13367 1082 aa16.52■□□□□ 0.23
CNOT9-208ENST00000542068 LONRF1Q17RB8 773 aa16.52■□□□□ 0.23
CNOT9-208ENST00000542068 ANKS4BQ8N8V4 417 aa16.52■□□□□ 0.23
CNOT9-208ENST00000542068 CCDC63Q8NA47 563 aa16.52■□□□□ 0.23
CNOT9-208ENST00000542068 TACO1Q9BSH4 297 aaKnown RBP16.52■□□□□ 0.23
CNOT9-208ENST00000542068 ABCF3Q9NUQ8 709 aa16.52■□□□□ 0.23
CNOT9-208ENST00000542068 ANKRD63C9JTQ0 380 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 FTLP02792 175 aaPredicted RBP16.51■□□□□ 0.23
CNOT9-208ENST00000542068 PSMC2P35998 433 aaKnown RBP16.51■□□□□ 0.23
CNOT9-208ENST00000542068 FMO5P49326 533 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 ARHGAP27Q6ZUM4 889 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 CCDC127Q96BQ5 260 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 AGBL1Q96MI9 1066 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 INTS2Q9H0H0 1204 aaKnown RBP16.51■□□□□ 0.23
CNOT9-208ENST00000542068 METTL14Q9HCE5 456 aaKnown RBP16.51■□□□□ 0.23
CNOT9-208ENST00000542068 TBK1Q9UHD2 729 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 FRMD4BQ9Y2L6 1034 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 NAV1Q8NEY1 1877 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 CCT8L1PA6NM43 557 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 CALCAP01258 141 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 ELF1P32519 619 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 PRKCIP41743 596 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 TNIP1Q15025 636 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 EMC10Q5UCC4 262 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 RINT1Q6NUQ1 792 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 SEPT14Q6ZU15 432 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 KAT5Q92993 513 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 FAM118BQ9BPY3 351 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 FAM129AQ9BZQ8 928 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 K7ENM7 598 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 FOSP01100 380 aaPredicted RBP16.51■□□□□ 0.23
CNOT9-208ENST00000542068 ZBTB48P10074 688 aaPredicted RBP16.51■□□□□ 0.23
CNOT9-208ENST00000542068 LMNB1P20700 586 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 JAM2P57087 298 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 HYIQ5T013 277 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 ERMARDQ5T6L9 678 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 SLFN11Q7Z7L1 901 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 RASGEF1CQ8N431 466 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 CCT6BQ92526 530 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 PARVGQ9HBI0 331 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 SUFUQ9UMX1 484 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 NRAPQ86VF7 1730 aa16.51■□□□□ 0.23
CNOT9-208ENST00000542068 SKAP2O75563 359 aaPredicted RBP16.5■□□□□ 0.23
CNOT9-208ENST00000542068 EIF2AK2P19525 551 aaKnown RBP16.5■□□□□ 0.23
CNOT9-208ENST00000542068 PTENP60484 403 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 DDX23Q9BUQ8 820 aaKnown RBP16.5■□□□□ 0.23
CNOT9-208ENST00000542068 CCPG1Q9ULG6 757 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 ATXN2Q99700 1313 aaKnown RBP16.5■□□□□ 0.23
CNOT9-208ENST00000542068 SPOPO43791 374 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 GCLMP48507 274 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 DLG4P78352 724 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 MYL7Q01449 175 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 MYO1EQ12965 1108 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 C1orf54Q8WWF1 131 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 PAIP2Q9BPZ3 127 aaKnown RBP16.5■□□□□ 0.23
CNOT9-208ENST00000542068 PAGR1Q9BTK6 254 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 WDR18Q9BV38 432 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 PDGFDQ9GZP0 370 aaPredicted RBP16.5■□□□□ 0.23
CNOT9-208ENST00000542068 PABPC3Q9H361 631 aaKnown RBP16.5■□□□□ 0.23
CNOT9-208ENST00000542068 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
CNOT9-208ENST00000542068 BTNL10A8MVZ5 291 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 CES2O00748 559 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 PPFIA2O75334 1257 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 SPIRE1Q08AE8 756 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 DUPD1Q68J44 220 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 TTC27Q6P3X3 843 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 CCDC137Q6PK04 289 aaKnown RBP16.5■□□□□ 0.23
CNOT9-208ENST00000542068 STAMBPL1Q96FJ0 436 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 PWWP2AQ96N64 755 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 EPB41L4BQ9H329 900 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 CTNNAL1Q9UBT7 734 aa16.5■□□□□ 0.23
CNOT9-208ENST00000542068 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 SMCHD1A6NHR9 2005 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 DDX60LQ5H9U9 1706 aaKnown RBP16.49■□□□□ 0.23
CNOT9-208ENST00000542068 COL22A1Q8NFW1 1626 aaPredicted RBP16.49■□□□□ 0.23
CNOT9-208ENST00000542068 CCDC169A6NNP5 214 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 KIAA0391O15091 583 aaKnown RBP16.49■□□□□ 0.23
CNOT9-208ENST00000542068 MAPK7Q13164 816 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 PREPLQ4J6C6 727 aaPredicted RBP16.49■□□□□ 0.23
CNOT9-208ENST00000542068 PHLDB3Q6NSJ2 640 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.49■□□□□ 0.235e-8■■■■■ 65.3
CNOT9-208ENST00000542068 PRCCQ92733 491 aaPredicted RBP16.49■□□□□ 0.23
CNOT9-208ENST00000542068 LXNQ9BS40 222 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 ADAM33Q9BZ11 813 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 NOD2Q9HC29 1040 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 FGFR1OP2Q9NVK5 253 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 RASAL2Q9UJF2 1139 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 COMTP21964 271 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 ELF3P78545 371 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms