RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 DPY19L2P1Q6NXN4 242 aa14.62□□□□□ -0.07
PTPN1-202ENST00000541713 TADA2BQ86TJ2 420 aa14.62□□□□□ -0.07
PTPN1-202ENST00000541713 CRYGNQ8WXF5 182 aa14.62□□□□□ -0.07
PTPN1-202ENST00000541713 PBKQ96KB5 322 aa14.62□□□□□ -0.07
PTPN1-202ENST00000541713 PAIP2Q9BPZ3 127 aaKnown RBP14.62□□□□□ -0.07
PTPN1-202ENST00000541713 FAM213AQ9BRX8 229 aa14.62□□□□□ -0.07
PTPN1-202ENST00000541713 POLR3CQ9BUI4 534 aaPredicted RBP14.62□□□□□ -0.07
PTPN1-202ENST00000541713 ISCUQ9H1K1 167 aa14.62□□□□□ -0.07
PTPN1-202ENST00000541713 SEMA4AQ9H3S1 761 aa14.62□□□□□ -0.07
PTPN1-202ENST00000541713 AHDC1Q5TGY3 1603 aaPredicted RBP14.62□□□□□ -0.07
PTPN1-202ENST00000541713 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 ADRB2P07550 413 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 PYGMP11217 842 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 ACOT2P49753 483 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 CETN1Q12798 172 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 NLRP14Q86W24 1093 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 TAS1R2Q8TE23 839 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 ZNF473Q8WTR7 871 aaKnown RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 RFFLQ8WZ73 363 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 SEMA4DQ92854 862 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 HAUS1Q96CS2 278 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 RMDN3Q96TC7 470 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 AZI2Q9H6S1 392 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 DENND3A2RUS2 1198 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 GAP43P17677 238 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 LMNB1P20700 586 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 YWHABP31946 246 aaKnown RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 MDH1P40925 334 aaKnown RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 SLC29A2Q14542 456 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 NOP9Q86U38 636 aaKnown RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 CAVIN3Q969G5 261 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 ANKFY1Q9P2R3 1169 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 SERPINA10Q9UK55 444 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 DLEC1Q9Y238 1755 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 HNRNPDLO14979 420 aaKnown RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 VIMP08670 466 aaKnown RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 PSMC4P43686 418 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 MTMR2Q13614 643 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 RASA3Q14644 834 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 GLE1Q53GS7 698 aaKnown RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 STXBP4Q6ZWJ1 553 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 CDR2LQ86X02 465 aaPredicted RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 EPS8L3Q8TE67 593 aaKnown RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 WHAMMQ8TF30 809 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 SCFD2Q8WU76 684 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
PTPN1-202ENST00000541713 CEP170P1Q96L14 293 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 NUP85Q9BW27 656 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 VCPKMTQ9H867 229 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 KCNK9Q9NPC2 374 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 ASIC3Q9UHC3 531 aa14.61□□□□□ -0.07
PTPN1-202ENST00000541713 DNAH12Q6ZR08 3092 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 GOLGA6L10A0A0M3HER8 536 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 BCRP11274 1271 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 TNNI1P19237 187 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 ECHS1P30084 290 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 ZKSCAN8Q15776 578 aaPredicted RBP14.6□□□□□ -0.07
PTPN1-202ENST00000541713 ARHGEF16Q5VV41 709 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 DPH6Q7L8W6 267 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 PPP1R16BQ96T49 567 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 TMX2Q9Y320 296 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 RIPK3Q9Y572 518 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 CTNND1O60716 968 aaKnown RBP14.6□□□□□ -0.07
PTPN1-202ENST00000541713 MARSP56192 900 aaKnown RBP14.6□□□□□ -0.07
PTPN1-202ENST00000541713 SF3B2Q13435 895 aaKnown RBP14.6□□□□□ -0.07
PTPN1-202ENST00000541713 MTERF2Q49AM1 385 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 SYCP2LQ5T4T6 812 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 GPATCH11Q8N954 259 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 IPO4Q8TEX9 1081 aaKnown RBP14.6□□□□□ -0.07
PTPN1-202ENST00000541713 LRRC45Q96CN5 670 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 SH3GL2Q99962 352 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 MXRA8Q9BRK3 442 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 PI4K2BG5E9Z4 385 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 O00370 1275 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 TBX3O15119 743 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 JAM2P57087 298 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 SWSAP1Q6NVH7 229 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 SYCE1Q8N0S2 351 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 XXYLT1Q8NBI6 393 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 GMCL1P1Q8NEA9 526 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 DYDC1Q8WWB3 177 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 PPM1EQ8WY54 764 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 CABS1Q96KC9 395 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 FIZ1Q96SL8 496 aa14.6□□□□□ -0.07
PTPN1-202ENST00000541713 ACTN3Q08043 901 aaPredicted RBP14.59□□□□□ -0.07
PTPN1-202ENST00000541713 PTGISQ16647 500 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 LONRF1Q17RB8 773 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 SCARA3Q6AZY7 606 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 CCDC137Q6PK04 289 aaKnown RBP14.59□□□□□ -0.07
PTPN1-202ENST00000541713 JAMLQ86YT9 394 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 MYCBPAPQ8TBZ2 947 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 GPR88Q9GZN0 384 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 TMEM117Q9H0C3 514 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 GABBR1Q9UBS5 961 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 RNF14Q9UBS8 474 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 RARRES1P49788 294 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 OSTNP61366 133 aa14.59□□□□□ -0.07
PTPN1-202ENST00000541713 MRPS9P82933 396 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms