RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 COL4A3BPQ9Y5P4 624 aa14.67□□□□□ -0.06
SCARB1-207ENST00000541661 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 AOC1P19801 751 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 KLRC2P26717 231 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 HOXA11P31270 313 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-207ENST00000541661 QARSP47897 775 aaKnown RBP14.66□□□□□ -0.06
SCARB1-207ENST00000541661 SSRP1Q08945 709 aaKnown RBP14.66□□□□□ -0.06
SCARB1-207ENST00000541661 PPP2R5CQ13362 524 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 NPY5RQ15761 445 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 UBXN11Q5T124 520 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 GALNT17Q6IS24 598 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 EXOC8Q8IYI6 725 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 TRIM22Q8IYM9 498 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 CMASQ8NFW8 434 aaPredicted RBP14.66□□□□□ -0.06
SCARB1-207ENST00000541661 RHOBTB2Q9BYZ6 727 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 DHX33Q9H6R0 707 aaKnown RBP14.66□□□□□ -0.06
SCARB1-207ENST00000541661 RSAD1Q9HA92 442 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 KCNK12Q9HB15 430 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 MRPL17Q9NRX2 175 aaKnown RBP14.66□□□□□ -0.06
SCARB1-207ENST00000541661 DDX25Q9UHL0 483 aaKnown RBP14.66□□□□□ -0.06
SCARB1-207ENST00000541661 FAN1Q9Y2M0 1017 aa14.66□□□□□ -0.06
SCARB1-207ENST00000541661 SPTBN4Q9H254 2564 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 EML1O00423 815 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 NRP1O14786 923 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 DKC1O60832 514 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■■■■□ 19.3
SCARB1-207ENST00000541661 DEXIO95424 95 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 EFEMP2O95967 443 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 AFF1P51825 1210 aaKnown RBP14.65□□□□□ -0.06
SCARB1-207ENST00000541661 NPEPPSP55786 919 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 LETM2Q2VYF4 491 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 PLA2G4FQ68DD2 849 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 CYP26C1Q6V0L0 522 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 FLCNQ8NFG4 579 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 PRPF31Q8WWY3 499 aaKnown RBP14.65□□□□□ -0.06
SCARB1-207ENST00000541661 SLC7A3Q8WY07 619 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 FAM20AQ96MK3 541 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 MINDY3Q9H8M7 445 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 KCNMB3Q9NPA1 279 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 UBN1Q9NPG3 1134 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 IGSF9Q9P2J2 1179 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 DUSP12Q9UNI6 340 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 SSX2IPQ9Y2D8 614 aa14.65□□□□□ -0.06
SCARB1-207ENST00000541661 PTPRZ1P23471 2315 aaPredicted RBP14.65□□□□□ -0.06
SCARB1-207ENST00000541661 RIF1Q5UIP0 2472 aaKnown RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 INPPL1O15357 1258 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 ASAP2O43150 1006 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 PI15O43692 258 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 PAPLNO95428 1278 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 SOD2P04179 222 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 P4HBP07237 508 aaKnown RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 RFC5P40937 340 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 TOB2Q14106 344 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 NONOQ15233 471 aaKnown RBP eCLIP14.64□□□□□ -0.072e-6■■■□□ 18.3
SCARB1-207ENST00000541661 FRMD5Q7Z6J6 570 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 CCDC105Q8IYK2 499 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 ZNF579Q8NAF0 562 aaKnown RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 CNNM3Q8NE01 707 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 PSPC1Q8WXF1 523 aaKnown RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 NKD2Q969F2 451 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 ZNF274Q96GC6 653 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 FAM193BQ96PV7 902 aaPredicted RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 RTP3Q9BQQ7 232 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 VAV3Q9UKW4 847 aa14.64□□□□□ -0.07
SCARB1-207ENST00000541661 MTCL1Q9Y4B5 1905 aaKnown RBP14.64□□□□□ -0.07
SCARB1-207ENST00000541661 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 SLC37A4O43826 429 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 GAS2O43903 313 aaKnown RBP14.63□□□□□ -0.07
SCARB1-207ENST00000541661 N4BP1O75113 896 aaKnown RBP14.63□□□□□ -0.07
SCARB1-207ENST00000541661 C1RP00736 705 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 SSBP05455 408 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCARB1-207ENST00000541661 SRGAP2CP0DJJ0 459 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 LAMTOR4Q0VGL1 99 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 PCBP1Q15365 356 aaKnown RBP eCLIP14.63□□□□□ -0.074e-11■■■□□ 14.6
SCARB1-207ENST00000541661 INF2Q27J81 1249 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 KIAA0319Q5VV43 1072 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 PPP4R3AQ6IN85 833 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 RUFY3Q7L099 469 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 KRT25Q7Z3Z0 450 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 C4orf19Q8IY42 314 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 COLGALT2Q8IYK4 626 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 RNF168Q8IYW5 571 aaPredicted RBP14.63□□□□□ -0.07
SCARB1-207ENST00000541661 SMG8Q8ND04 991 aaKnown RBP14.63□□□□□ -0.07
SCARB1-207ENST00000541661 HDAC7Q8WUI4 952 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 CEP170P1Q96L14 293 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 RPS6KC1Q96S38 1066 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 HERC2P3Q9BVR0 1158 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 RXFP1Q9HBX9 757 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 ZSWIM6Q9HCJ5 1215 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 WDR6Q9NNW5 1121 aaKnown RBP14.63□□□□□ -0.07
SCARB1-207ENST00000541661 MARCH5Q9NX47 278 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 WRAP73Q9P2S5 460 aaPredicted RBP14.63□□□□□ -0.07
SCARB1-207ENST00000541661 DPP7Q9UHL4 492 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 FAM186AA6NE01 2351 aa14.63□□□□□ -0.07
SCARB1-207ENST00000541661 TDRD15B5MCY1 1934 aaKnown RBP14.62□□□□□ -0.07
SCARB1-207ENST00000541661 DCHS1Q96JQ0 3298 aa14.62□□□□□ -0.07
SCARB1-207ENST00000541661 ARID2Q68CP9 1835 aa14.62□□□□□ -0.07
SCARB1-207ENST00000541661 CCDC195A0A1B0GUA6 201 aa14.62□□□□□ -0.07
SCARB1-207ENST00000541661 POMCP01189 267 aa14.62□□□□□ -0.07
SCARB1-207ENST00000541661 URODP06132 367 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms