RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 STRN3Q13033 797 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 MKRN4PQ13434 485 aaPredicted RBP9.48□□□□□ -0.89
THBS3-210ENST00000541576 CAPSQ13938 189 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 MXD4Q14582 209 aaPredicted RBP9.48□□□□□ -0.89
THBS3-210ENST00000541576 SYT10Q6XYQ8 523 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 METTL13Q8N6R0 699 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 RETREG2Q8NC44 543 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 KCNN1Q92952 543 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 BORCS6Q96GS4 357 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 PCMTD1Q96MG8 357 aaPredicted RBP9.48□□□□□ -0.89
THBS3-210ENST00000541576 CBWD1Q9BRT8 395 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 COL1A2P08123 1366 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 ANKRD65E5RJM6 399 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 HNRNPDLO14979 420 aaKnown RBP9.48□□□□□ -0.89
THBS3-210ENST00000541576 MAGEB2O15479 319 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 MFAP3LO75121 409 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 C22orf31O95567 290 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 CPT1AP50416 773 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 HTRA3P83110 453 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 CAP1Q01518 475 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 LAMTOR4Q0VGL1 99 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 EFCAB12Q6NXP0 572 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 TAS1R3Q7RTX0 852 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 XXYLT1Q8NBI6 393 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 BICD1Q96G01 975 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 PCIF1Q9H4Z3 704 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 HSPBP1Q9NZL4 362 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 SUCLA2Q9P2R7 463 aaPredicted RBP9.48□□□□□ -0.89
THBS3-210ENST00000541576 SIK3Q9Y2K2 1263 aa9.48□□□□□ -0.89
THBS3-210ENST00000541576 KAT6AQ92794 2004 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 ANKRD63C9JTQ0 380 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 K7ERI5 159 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 ADCY3O60266 1144 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 CYBAP13498 195 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 TRIM21P19474 475 aaKnown RBP9.47□□□□□ -0.89
THBS3-210ENST00000541576 KCNMA1Q12791 1236 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 PPFIA1Q13136 1202 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 DCAF17Q5H9S7 520 aaPredicted RBP9.47□□□□□ -0.89
THBS3-210ENST00000541576 TCERG1LQ5VWI1 586 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 CNGA4Q8IV77 575 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 TRPV1Q8NER1 839 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 BAG1Q99933 345 aaPredicted RBP9.47□□□□□ -0.89
THBS3-210ENST00000541576 CALCOCO1Q9P1Z2 691 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 EVPLQ92817 2033 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 CENPFP49454 3210 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 CASP8AP2Q9UKL3 1982 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 EPHB6O15197 1021 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 SRGAP2CP0DJJ0 459 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 KLRC1P26715 233 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 CLCN3P51790 818 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 ARHGAP29Q52LW3 1261 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 RHPN2Q8IUC4 686 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 ZSWIM2Q8NEG5 633 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 ZBTB10Q96DT7 871 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 PANX2Q96RD6 677 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 NUP58Q9BVL2 599 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 TTYH3Q9C0H2 523 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 AGPAT5Q9NUQ2 364 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 PHLPP2Q6ZVD8 1323 aa9.47□□□□□ -0.89
THBS3-210ENST00000541576 TRIM66O15016 1216 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 DUSP11O75319 330 aaKnown RBP9.46□□□□□ -0.89
THBS3-210ENST00000541576 F2P00734 622 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 AFPP02771 609 aaKnown RBP9.46□□□□□ -0.89
THBS3-210ENST00000541576 HOXD10P28358 340 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 ADSSP30520 456 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 KRT9P35527 623 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 LIG4P49917 911 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 EFNA5P52803 228 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 TFDP1Q14186 410 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 GRIK4Q16099 956 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 E4F1Q66K89 784 aaPredicted RBP9.46□□□□□ -0.89
THBS3-210ENST00000541576 RDH13Q8NBN7 331 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 RNF149Q8NC42 400 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 SLC35C1Q96A29 364 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 TMEM134Q9H6X4 195 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 ASAP2O43150 1006 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 TMOD1P28289 359 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 CHMP4BP1P59074 171 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 BEX3Q00994 111 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 FSCN1Q16658 493 aaKnown RBP9.46□□□□□ -0.89
THBS3-210ENST00000541576 KIAA0753Q2KHM9 967 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 CDCA2Q69YH5 1023 aaPredicted RBP9.46□□□□□ -0.89
THBS3-210ENST00000541576 SLC39A4Q6P5W5 647 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 MTHFD1LQ6UB35 978 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 ZBTB8OSQ8IWT0 167 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 CD99L2Q8TCZ2 262 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 POMGNT1Q8WZA1 660 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 KAT2BQ92831 832 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 IQCDQ96DY2 449 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 CCDC51Q96ER9 411 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 CRACR2AQ9BSW2 395 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 MMRN2Q9H8L6 949 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 SRRDQ9UH36 339 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 RSPH14Q9UHP6 348 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 CAPN11Q9UMQ6 739 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 USP20Q9Y2K6 914 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 PAXBP1Q9Y5B6 917 aa9.46□□□□□ -0.89
THBS3-210ENST00000541576 GPR25O00155 361 aa9.46□□□□□ -0.9
THBS3-210ENST00000541576 MYL3P08590 195 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms