RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 CHD8Q9HCK8 2581 aa13.3□□□□□ -0.28
COPA-205ENST00000541366 WDR64B1ANS9 1081 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 EDIL3O43854 480 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 POMCP01189 267 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 SFPQP23246 707 aaKnown RBP eCLIP13.29□□□□□ -0.28
COPA-205ENST00000541366 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
COPA-205ENST00000541366 NONOQ15233 471 aaKnown RBP eCLIP13.29□□□□□ -0.28
COPA-205ENST00000541366 RTN1Q16799 776 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 CREB3L3Q68CJ9 461 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 PHLDB3Q6NSJ2 640 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 DCLRE1AQ6PJP8 1040 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 GET4Q7L5D6 327 aaPredicted RBP13.29□□□□□ -0.28
COPA-205ENST00000541366 CATSPER4Q7RTX7 472 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 ZNF710Q8N1W2 664 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 PJA1Q8NG27 643 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 B3GALT6Q96L58 329 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 CEP89Q96ST8 783 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 UNC45AQ9H3U1 944 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 RBM28Q9NW13 759 aaKnown RBP13.29□□□□□ -0.28
COPA-205ENST00000541366 MARCH5Q9NX47 278 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
COPA-205ENST00000541366 PCDHB2Q9Y5E7 798 aa13.29□□□□□ -0.28
COPA-205ENST00000541366 MSH4O15457 936 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 ZNF623O75123 536 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 STBD1O95210 358 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 SOD2P04179 222 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 ALDH2P05091 517 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 URODP06132 367 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 LAMP2P13473 410 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 ATXN1P54253 815 aaKnown RBP13.28□□□□□ -0.28
COPA-205ENST00000541366 HTR4Q13639 388 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 AAMPQ13685 434 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 SYNE3Q6ZMZ3 975 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 RHPN2Q8IUC4 686 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 GLYCTKQ8IVS8 523 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 STAMQ92783 540 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 RPS6KC1Q96S38 1066 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 SEPT9Q9UHD8 586 aaPredicted RBP13.28□□□□□ -0.28
COPA-205ENST00000541366 NUMBLQ9Y6R0 609 aa13.28□□□□□ -0.28
COPA-205ENST00000541366 MIA3Q5JRA6 1907 aa13.27□□□□□ -0.28
COPA-205ENST00000541366 IGKV6-21A0A0C4DH24 114 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 GOLGA8AA7E2F4 631 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 GOLGA8BA8MQT2 603 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 hCG_1984214I3L0E3 225 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 ZBTB43O43298 467 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 KINO60870 393 aaKnown RBP13.27□□□□□ -0.29
COPA-205ENST00000541366 GLUD1P00367 558 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 ADH1AP07327 375 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 SKIP12755 728 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 KIAA0319Q5VV43 1072 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 TEX2Q8IWB9 1127 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 REXO1Q8N1G1 1221 aaKnown RBP13.27□□□□□ -0.29
COPA-205ENST00000541366 ZNF713Q8N859 430 aaPredicted RBP13.27□□□□□ -0.29
COPA-205ENST00000541366 URGCPQ8TCY9 931 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 NLRP4Q96MN2 994 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 FAM193BQ96PV7 902 aaPredicted RBP13.27□□□□□ -0.29
COPA-205ENST00000541366 HERC2P3Q9BVR0 1158 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 RSAD1Q9HA92 442 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 SUCLA2Q9P2R7 463 aaPredicted RBP13.27□□□□□ -0.29
COPA-205ENST00000541366 NCDNQ9UBB6 729 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 MTF2Q9Y483 593 aaPredicted RBP13.27□□□□□ -0.29
COPA-205ENST00000541366 MYH15Q9Y2K3 1946 aa13.27□□□□□ -0.29
COPA-205ENST00000541366 DCDC2BA2VCK2 349 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 CARNS1A5YM72 827 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 ANHXE9PGG2 379 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 GAS7O60861 476 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 RPL17P18621 184 aaKnown RBP13.26□□□□□ -0.29
COPA-205ENST00000541366 CIITAP33076 1130 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 ADD1P35611 737 aaKnown RBP13.26□□□□□ -0.29
COPA-205ENST00000541366 OR1G1P47890 313 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 RAB27AP51159 221 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 GPC5P78333 572 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 SNW1Q13573 536 aaKnown RBP13.26□□□□□ -0.29
COPA-205ENST00000541366 NECTIN1Q15223 517 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 PFKFB3Q16875 520 aaPredicted RBP13.26□□□□□ -0.29
COPA-205ENST00000541366 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
COPA-205ENST00000541366 UBXN11Q5T124 520 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 MRPL10Q7Z7H8 261 aaKnown RBP13.26□□□□□ -0.29
COPA-205ENST00000541366 RSPH1Q8WYR4 309 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 FGF14Q92915 247 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 NXPE3Q969Y0 559 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 NT5C3AQ9H0P0 336 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 MINDY3Q9H8M7 445 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 PIDD1Q9HB75 910 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 IFT122Q9HBG6 1241 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 SLC2A4RGQ9NR83 387 aa13.26□□□□□ -0.29
COPA-205ENST00000541366 MTCL1Q9Y4B5 1905 aaKnown RBP13.26□□□□□ -0.29
COPA-205ENST00000541366 KLF18A0A0U1RQI7 1052 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 TGM5O43548 720 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 GAS2O43903 313 aaKnown RBP13.25□□□□□ -0.29
COPA-205ENST00000541366 EFEMP2O95967 443 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 CD72P21854 359 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 HOXA11P31270 313 aaPredicted RBP13.25□□□□□ -0.29
COPA-205ENST00000541366 GLUD2P49448 558 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 STARD6P59095 220 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 NTHL1P78549 312 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 EXOSC10Q01780 885 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms