RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 PRICKLE3O43900 615 aaPredicted RBP7.09□□□□□ -1.27
SUDS3-202ENST00000541280 THBS2P35442 1172 aa7.09□□□□□ -1.27
SUDS3-202ENST00000541280 RARSP54136 660 aaKnown RBP7.09□□□□□ -1.27
SUDS3-202ENST00000541280 ZNF280AP59817 542 aaPredicted RBP7.09□□□□□ -1.27
SUDS3-202ENST00000541280 EFEMP1Q12805 493 aa7.09□□□□□ -1.27
SUDS3-202ENST00000541280 UBE4AQ14139 1066 aa7.09□□□□□ -1.27
SUDS3-202ENST00000541280 ZNF761Q86XN6 746 aaPredicted RBP7.09□□□□□ -1.27
SUDS3-202ENST00000541280 DCPSQ96C86 337 aaKnown RBP7.09□□□□□ -1.27
SUDS3-202ENST00000541280 TRMT2BQ96GJ1 504 aaKnown RBP7.09□□□□□ -1.27
SUDS3-202ENST00000541280 TMEM169Q96HH4 297 aa7.09□□□□□ -1.27
SUDS3-202ENST00000541280 USP44Q9H0E7 712 aa7.09□□□□□ -1.27
SUDS3-202ENST00000541280 NGRNQ9NPE2 291 aaKnown RBP7.09□□□□□ -1.27
SUDS3-202ENST00000541280 HDAC9Q9UKV0 1011 aa7.09□□□□□ -1.27
SUDS3-202ENST00000541280 NOB1Q9ULX3 412 aaKnown RBP7.09□□□□□ -1.27
SUDS3-202ENST00000541280 DLG5Q8TDM6 1919 aa7.09□□□□□ -1.27
SUDS3-202ENST00000541280 AGRPO00253 132 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 KLF4O43474 513 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 SMARCA5O60264 1052 aaPredicted RBP7.08□□□□□ -1.28
SUDS3-202ENST00000541280 GNAI3P08754 354 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 NBPF7P0C2Y1 421 aaPredicted RBP7.08□□□□□ -1.28
SUDS3-202ENST00000541280 UBTFL1P0CB47 393 aaPredicted RBP7.08□□□□□ -1.28
SUDS3-202ENST00000541280 RPL13P26373 211 aaKnown RBP7.08□□□□□ -1.28
SUDS3-202ENST00000541280 ECE1P42892 770 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 KRTAP10-2P60368 255 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 FKBP1AP62942 108 aaKnown RBP7.08□□□□□ -1.28
SUDS3-202ENST00000541280 PPP2R2AP63151 447 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 LSAMPQ13449 338 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 RTP5Q14D33 572 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 DDR2Q16832 855 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 PRR31Q5SQ13 230 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 TTLL5Q6EMB2 1281 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 ZNF804AQ7Z570 1209 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 ZC3H18Q86VM9 953 aaKnown RBP7.08□□□□□ -1.28
SUDS3-202ENST00000541280 CELF2-AS1Q8N7Q2 184 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 SUCLG2Q96I99 432 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 LNPKQ9C0E8 428 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 USP40Q9NVE5 1235 aa7.08□□□□□ -1.28
SUDS3-202ENST00000541280 COA3Q9Y2R0 106 aaPredicted RBP7.08□□□□□ -1.28
SUDS3-202ENST00000541280 GOLGB1Q14789 3259 aaKnown RBP7.07□□□□□ -1.28
SUDS3-202ENST00000541280 SLX4Q8IY92 1834 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 A0A1W2PQU0 124 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 RASSF10A6NK89 507 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 TADA3O75528 432 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 IL1R1P14778 569 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 KCNJ6P48051 423 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 ITGA1P56199 1179 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 GJA9P57773 515 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 DEFB115Q30KQ5 88 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 CAVIN4Q5BKX8 364 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 EPHA10Q5JZY3 1008 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 MILR1Q7Z6M3 343 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 FAM26EQ8N5C1 309 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 ADAMTS17Q8TE56 1095 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 HNRNPLLQ8WVV9 542 aaKnown RBP7.07□□□□□ -1.28
SUDS3-202ENST00000541280 SGSM3Q96HU1 749 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 CDIP1Q9H305 208 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 BICC1Q9H694 974 aaKnown RBP7.07□□□□□ -1.28
SUDS3-202ENST00000541280 CD209Q9NNX6 404 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 RIPOR2Q9Y4F9 1068 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 WDR90Q96KV7 1748 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 BRCA1P38398 1863 aaKnown RBP7.07□□□□□ -1.28
SUDS3-202ENST00000541280 ANKRD31Q8N7Z5 1873 aa7.07□□□□□ -1.28
SUDS3-202ENST00000541280 DLEC1Q9Y238 1755 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 HGSO14964 777 aaPredicted RBP7.06□□□□□ -1.28
SUDS3-202ENST00000541280 CIAO1O76071 339 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 PDE8BO95263 885 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 IFIT1P09914 478 aaKnown RBP7.06□□□□□ -1.28
SUDS3-202ENST00000541280 LCP1P13796 627 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 DNAJA1P31689 397 aaKnown RBP7.06□□□□□ -1.28
SUDS3-202ENST00000541280 HIBADHP31937 336 aaKnown RBP7.06□□□□□ -1.28
SUDS3-202ENST00000541280 GRIA2P42262 883 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 FKBP1BP68106 108 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 NFKB2Q00653 900 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 MAP2K1Q02750 393 aaPredicted RBP7.06□□□□□ -1.28
SUDS3-202ENST00000541280 SMAD4Q13485 552 aaKnown RBP7.06□□□□□ -1.28
SUDS3-202ENST00000541280 CR1LQ2VPA4 569 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 FAM26FQ5R3K3 315 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 DACT2Q5SW24 774 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 CD300LDQ6UXZ3 194 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 ATF7IPQ6VMQ6 1270 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 KRT26Q7Z3Y9 468 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 KCTD13Q8WZ19 329 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 KAZALD1Q96I82 304 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 MYOZ2Q9NPC6 264 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 ABT1Q9ULW3 272 aaKnown RBP7.06□□□□□ -1.28
SUDS3-202ENST00000541280 PCDHA2Q9Y5H9 948 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 ZNF609O15014 1411 aa7.06□□□□□ -1.28
SUDS3-202ENST00000541280 VIRMAQ69YN4 1812 aaKnown RBP7.06□□□□□ -1.28
SUDS3-202ENST00000541280 ZBED9Q6R2W3 1325 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 EYA2O00167 538 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 PLIN1O60240 522 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 TAF5LO75529 589 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 CELF2O95319 508 aaKnown RBP7.05□□□□□ -1.28
SUDS3-202ENST00000541280 MAP2K2P36507 400 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 TBC1D10BQ4KMP7 808 aaPredicted RBP7.05□□□□□ -1.28
SUDS3-202ENST00000541280 METTL24Q5JXM2 366 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 ZKSCAN2Q63HK3 967 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 CYP4F22Q6NT55 531 aa7.05□□□□□ -1.28
SUDS3-202ENST00000541280 RSPO2Q6UXX9 243 aaPredicted RBP7.05□□□□□ -1.28
SUDS3-202ENST00000541280 ANKS3Q6ZW76 656 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms