RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 SKIV2LQ15477 1246 aaKnown RBP15.72■□□□□ 0.11
USP28-209ENST00000540925 CTC1Q2NKJ3 1217 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 NOTUMQ6P988 496 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 KCNT2Q6UVM3 1135 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 C1orf186Q6ZWK4 172 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 ABI1Q8IZP0 508 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 LRRC15Q8TF66 581 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 POF1BQ8WVV4 589 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 PRIMPOLQ96LW4 560 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 EIF2AQ9BY44 585 aaKnown RBP15.72■□□□□ 0.11
USP28-209ENST00000540925 MRPL9Q9BYD2 267 aaKnown RBP15.72■□□□□ 0.11
USP28-209ENST00000540925 CSRNP2Q9H175 543 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 UBE2ZQ9H832 354 aaPredicted RBP15.72■□□□□ 0.11
USP28-209ENST00000540925 TBC1D13Q9NVG8 400 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 LZTS1Q9Y250 596 aa15.72■□□□□ 0.11
USP28-209ENST00000540925 MORC2Q9Y6X9 1032 aaPredicted RBP15.72■□□□□ 0.11
USP28-209ENST00000540925 CNTNAP2Q9UHC6 1331 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 LRRIQ4A6NIV6 560 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 TTLL13PA6NNM8 815 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 FSCN2O14926 492 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 B4GALT3O60512 393 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 EDN1P05305 212 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 IRS1P35568 1242 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 AFF1P51825 1210 aaKnown RBP15.71■□□□□ 0.11
USP28-209ENST00000540925 HYAL1Q12794 435 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 RINT1Q6NUQ1 792 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 GLB1LQ6UWU2 654 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 KIFAP3Q92845 792 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 PGBD4Q96DM1 585 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 PABPC5Q96DU9 382 aaKnown RBP15.71■□□□□ 0.11
USP28-209ENST00000540925 CPB2Q96IY4 423 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 RUSC1Q9BVN2 902 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 PRMT7Q9NVM4 692 aaPredicted RBP15.71■□□□□ 0.11
USP28-209ENST00000540925 IPPQ9Y573 584 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 CLIC4Q9Y696 253 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 C5orf42Q9H799 3197 aa15.71■□□□□ 0.11
USP28-209ENST00000540925 BDP1A6H8Y1 2624 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 STX6O43752 255 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 GUCY2CP25092 1073 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 LONP1P36776 959 aaKnown RBP15.7■□□□□ 0.1
USP28-209ENST00000540925 LTBRP36941 435 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 PBX3P40426 434 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 KCNQ1P51787 676 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 SLC12A3P55017 1021 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 PPP2R5AQ15172 486 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 LONRF3Q496Y0 759 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 NOMO2Q5JPE7 1267 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 FAM173BQ6P4H8 233 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 SLC27A1Q6PCB7 646 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 SLC39A11Q8N1S5 342 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 CNNM3Q8NE01 707 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 ZNF558Q96NG5 402 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 NT5C3AQ9H0P0 336 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 C2orf40Q9H1Z8 148 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 POLD4Q9HCU8 107 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 RAPGEFL1Q9UHV5 662 aa15.7■□□□□ 0.1
USP28-209ENST00000540925 HIP1RO75146 1068 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 PPM1AP35813 382 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 BCAR1P56945 870 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 ERVFC1P60507 584 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 AAK1Q2M2I8 961 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 LEXMQ3ZCV2 418 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 SPOUT1Q5T280 376 aaKnown RBP15.69■□□□□ 0.1
USP28-209ENST00000540925 ADGRD2Q7Z7M1 963 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 CABP7Q86V35 215 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 ZBTB8OSQ8IWT0 167 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 THNSL1Q8IYQ7 743 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 SYT2Q8N9I0 419 aaPredicted RBP15.69■□□□□ 0.1
USP28-209ENST00000540925 MRPS27Q92552 414 aaKnown RBP15.69■□□□□ 0.1
USP28-209ENST00000540925 SYMPKQ92797 1274 aaKnown RBP15.69■□□□□ 0.1
USP28-209ENST00000540925 KIFC3Q9BVG8 833 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 TIPINQ9BVW5 301 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 NRDE2Q9H7Z3 1164 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 RSAD1Q9HA92 442 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 SPG21Q9NZD8 308 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 ARHGAP28Q9P2N2 729 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 PCDHGC5Q9Y5F6 944 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 ZMYM2Q9UBW7 1377 aa15.69■□□□□ 0.1
USP28-209ENST00000540925 ACKR2O00590 384 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 NCK2O43639 380 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 GALTP07902 379 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 GTF2F1P35269 517 aaKnown RBP eCLIP15.68■□□□□ 0.1
USP28-209ENST00000540925 NPTX2P47972 431 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 EFNA5P52803 228 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 NCBP1Q09161 790 aaKnown RBP15.68■□□□□ 0.1
USP28-209ENST00000540925 ARSHQ5FYA8 562 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 TAS1R3Q7RTX0 852 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 TMEM173Q86WV6 379 aaPredicted RBP15.68■□□□□ 0.1
USP28-209ENST00000540925 ZNF280BQ86YH2 543 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 GSTCDQ8NEC7 633 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 NTPCRQ9BSD7 190 aaKnown RBP15.68■□□□□ 0.1
USP28-209ENST00000540925 NXF3Q9H4D5 531 aaKnown RBP15.68■□□□□ 0.1
USP28-209ENST00000540925 ZSCAN16Q9H4T2 348 aaPredicted RBP15.68■□□□□ 0.1
USP28-209ENST00000540925 PDZD7Q9H5P4 517 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 C17orf75Q9HAS0 396 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 UBN1Q9NPG3 1134 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 TLR9Q9NR96 1032 aa15.68■□□□□ 0.1
USP28-209ENST00000540925 BLOC1S4Q9NUP1 217 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms