RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 KCNK9Q9NPC2 374 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 CCDC160A6NGH7 325 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 SPDYE16A6NNV3 312 aaPredicted RBP10.43□□□□□ -0.74
CLDN2-202ENST00000540876 ZNF213O14771 459 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 ATP5HO75947 161 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 OR6B1O95007 311 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 DPEP1P16444 411 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 SMARCA1P28370 1054 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 HALP42357 657 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 GSTA3Q16772 222 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 CRY2Q49AN0 593 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 VWA3BQ502W6 1294 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 TDRD12Q587J7 1177 aaKnown RBP10.43□□□□□ -0.74
CLDN2-202ENST00000540876 ZNF658Q5TYW1 1059 aaPredicted RBP10.43□□□□□ -0.74
CLDN2-202ENST00000540876 SLC2A7Q6PXP3 512 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 FBXL16Q8N461 479 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 NCOA7Q8NI08 942 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 EPS8L3Q8TE67 593 aaKnown RBP10.43□□□□□ -0.74
CLDN2-202ENST00000540876 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 NAP1L3Q99457 506 aaPredicted RBP10.43□□□□□ -0.74
CLDN2-202ENST00000540876 MINPP1Q9UNW1 487 aa10.43□□□□□ -0.74
CLDN2-202ENST00000540876 IQSEC3Q9UPP2 1182 aaPredicted RBP10.43□□□□□ -0.74
CLDN2-202ENST00000540876 XDHP47989 1333 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 KRIT1O00522 736 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 GPAA1O43292 621 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 PDE5AO76074 875 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 AGTP01019 485 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 ZFYP08048 801 aaPredicted RBP10.42□□□□□ -0.74
CLDN2-202ENST00000540876 HARSP12081 509 aaKnown RBP10.42□□□□□ -0.74
CLDN2-202ENST00000540876 RASSF2P50749 326 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 CCR3P51677 355 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 SLC34A1Q06495 639 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 RRAGAQ7L523 313 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 KBTBD2Q8IY47 623 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 MB21D2Q8IYB1 491 aaPredicted RBP10.42□□□□□ -0.74
CLDN2-202ENST00000540876 MYOCDQ8IZQ8 938 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 LRRC43Q8N309 656 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 CCDC82Q8N4S0 544 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 RBM46Q8TBY0 533 aaKnown RBP10.42□□□□□ -0.74
CLDN2-202ENST00000540876 NEK9Q8TD19 979 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 HSPBAP1Q96EW2 488 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 PRKAG3Q9UGI9 489 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 DENND2AQ9ULE3 1009 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 TSC22D4Q9Y3Q8 395 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 SPO11Q9Y5K1 396 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 RANBP6O60518 1105 aaKnown RBP10.42□□□□□ -0.74
CLDN2-202ENST00000540876 MARK3P27448 753 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 IGBP1P78318 339 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 MECOMQ03112 1051 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 SLC29A2Q14542 456 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 MEI1Q5TIA1 1274 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 TAOK1Q7L7X3 1001 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 NLGN2Q8NFZ4 835 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 SMC6Q96SB8 1091 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 SGIP1Q9BQI5 828 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 TRPV5Q9NQA5 729 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 PLAGL2Q9UPG8 496 aa10.42□□□□□ -0.74
CLDN2-202ENST00000540876 UTP11Q9Y3A2 253 aaKnown RBP10.42□□□□□ -0.74
CLDN2-202ENST00000540876 H0YIN7 160 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 SPTLC1O15269 473 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 PJA2O43164 708 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 TBX10O75333 385 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 CBX6O95503 412 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 GSTT2P0CG29 244 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 GSTT2BP0CG30 244 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 ITGA4P13612 1032 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 PLCG2P16885 1265 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 PMS2P54278 862 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 SSRP1Q08945 709 aaKnown RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 AP1B1Q10567 949 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 GRAPQ13588 217 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 GIT2Q14161 759 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 RPS6KA1Q15418 735 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 C6orf118Q5T5N4 469 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 RNF43Q68DV7 783 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 SATL1Q86VE3 508 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 TREML1Q86YW5 311 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 GRAPLQ8TC17 118 aaPredicted RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 STMN2Q93045 179 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 TGS1Q96RS0 853 aaKnown RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 TRIM51Q9BSJ1 452 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 NOC4LQ9BVI4 516 aaKnown RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 CUEDC2Q9H467 287 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 MMRN2Q9H8L6 949 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 GPR108Q9NPR9 543 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 SEC63Q9UGP8 760 aaKnown RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 DDX25Q9UHL0 483 aaKnown RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 TMEM59LQ9UK28 342 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 ITGB1BP2Q9UKP3 347 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 ZNF148Q9UQR1 794 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 DDX60Q8IY21 1712 aaKnown RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 GOLGA8AA7E2F4 631 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 ECE2O60344 883 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 RPN1P04843 607 aaKnown RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 PORP16435 677 aaPredicted RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 GEMIN4P57678 1058 aaKnown RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 DSTYKQ6XUX3 929 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 TXNRD3Q86VQ6 643 aa10.41□□□□□ -0.74
CLDN2-202ENST00000540876 DQX1Q8TE96 717 aaKnown RBP10.41□□□□□ -0.74
CLDN2-202ENST00000540876 INPP5DQ92835 1189 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms