RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 TEKT3Q9BXF9 490 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 PPP1R1BQ9UD71 204 aaPredicted RBP15.24■□□□□ 0.03
INO80E-203ENST00000540562 TBK1Q9UHD2 729 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 MYH11P35749 1972 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 PYGMP11217 842 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 CC2D2BQ6DHV5 1058 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 TTC27Q6P3X3 843 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 JAMLQ86YT9 394 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 NLGN1Q8N2Q7 840 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 RAPGEF5Q92565 580 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 BORCS6Q96GS4 357 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 HES6Q96HZ4 224 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 NACC1Q96RE7 527 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 ZHX2Q9Y6X8 837 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 CEP350Q5VT06 3117 aa15.24■□□□□ 0.03
INO80E-203ENST00000540562 H0YGN5 161 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 DDX3YO15523 660 aaKnown RBP15.23■□□□□ 0.03
INO80E-203ENST00000540562 ATP9AO75110 1047 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 LMNB1P20700 586 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 HNRNPH1P31943 449 aaKnown RBP15.23■□□□□ 0.03
INO80E-203ENST00000540562 SKOR1P84550 965 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 POLR3CQ9BUI4 534 aaPredicted RBP15.23■□□□□ 0.03
INO80E-203ENST00000540562 NFS1Q9Y697 457 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 NHSQ6T4R5 1651 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 HMGB1P1B2RPK0 211 aaPredicted RBP15.23■□□□□ 0.03
INO80E-203ENST00000540562 CLDN3O15551 220 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 PRKCIP41743 596 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 VAMP7P51809 220 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 SPP2Q13103 211 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 SEZ6Q53EL9 994 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 XKR9Q5GH70 373 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 NOP9Q86U38 636 aaKnown RBP15.23■□□□□ 0.03
INO80E-203ENST00000540562 SYCE1Q8N0S2 351 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 OLIG1Q8TAK6 271 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 ZNF653Q96CK0 615 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 OLFML3Q9NRN5 406 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 SUCLA2Q9P2R7 463 aaPredicted RBP15.23■□□□□ 0.03
INO80E-203ENST00000540562 SCN9AQ15858 1988 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 MEFVO15553 781 aaPredicted RBP15.23■□□□□ 0.03
INO80E-203ENST00000540562 PEX10O60683 326 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 ADRB2P07550 413 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 CREB1P16220 341 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 CUL1Q13616 776 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 KCNV1Q6PIU1 500 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 ANKRD42Q8N9B4 389 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 ATP8B4Q8TF62 1192 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 SPIRE2Q8WWL2 714 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 SEMA4DQ92854 862 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 GMCL1Q96IK5 515 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 CTNNAL1Q9UBT7 734 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 USTQ9Y2C2 406 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 STXBP5LQ9Y2K9 1186 aa15.23■□□□□ 0.03
INO80E-203ENST00000540562 GOLGA6L10A0A0M3HER8 536 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 TBX3O15119 743 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 RGL2O15211 777 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 RPL21P46778 160 aaKnown RBP15.22■□□□□ 0.03
INO80E-203ENST00000540562 DLGAP5Q15398 846 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 LONRF1Q17RB8 773 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 IPO4Q8TEX9 1081 aaKnown RBP15.22■□□□□ 0.03
INO80E-203ENST00000540562 CCDC114Q96M63 670 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 DDX23Q9BUQ8 820 aaKnown RBP15.22■□□□□ 0.03
INO80E-203ENST00000540562 IDI2Q9BXS1 227 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 HSPBP1Q9NZL4 362 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 DDX20Q9UHI6 824 aaKnown RBP15.22■□□□□ 0.03
INO80E-203ENST00000540562 SUGT1Q9Y2Z0 365 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 O00370 1275 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 VIMP08670 466 aaKnown RBP15.22■□□□□ 0.03
INO80E-203ENST00000540562 GAP43P17677 238 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 TNFRSF8P28908 595 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 MXI1P50539 228 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 PPP2R2AP63151 447 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 MAPK7Q13164 816 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 ZKSCAN8Q15776 578 aaPredicted RBP15.22■□□□□ 0.03
INO80E-203ENST00000540562 CCDC137Q6PK04 289 aaKnown RBP15.22■□□□□ 0.03
INO80E-203ENST00000540562 CYFIP1Q7L576 1253 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 ZC3H3Q8IXZ2 948 aaKnown RBP15.22■□□□□ 0.03
INO80E-203ENST00000540562 CPA5Q8WXQ8 436 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 SCLT1Q96NL6 688 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 NUP85Q9BW27 656 aa15.22■□□□□ 0.03
INO80E-203ENST00000540562 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
INO80E-203ENST00000540562 GMNCA6NCL1 334 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 SLC16A3O15427 465 aaKnown RBP15.21■□□□□ 0.03
INO80E-203ENST00000540562 PIAS1O75925 651 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 PPP1R7Q15435 360 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 HAUS6Q7Z4H7 955 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 CEP57Q86XR8 500 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 TATDN2Q93075 761 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
INO80E-203ENST00000540562 ZNF668Q96K58 619 aaPredicted RBP15.21■□□□□ 0.03
INO80E-203ENST00000540562 JPH2Q9BR39 696 aaPredicted RBP15.21■□□□□ 0.03
INO80E-203ENST00000540562 CHN1P15882 459 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 ICE2Q659A1 982 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 DENND2CQ68D51 928 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 CCDC121Q6ZUS5 278 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 LARGE2Q8N3Y3 721 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 GMCL1P1Q8NEA9 526 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 BICD1Q96G01 975 aa15.21■□□□□ 0.03
INO80E-203ENST00000540562 TMEM253P0C7T8 217 aa15.2■□□□□ 0.02
INO80E-203ENST00000540562 ZBTB48P10074 688 aaPredicted RBP15.2■□□□□ 0.02
INO80E-203ENST00000540562 BCRP11274 1271 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms