RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 USO1O60763 962 aaKnown RBP23.3■■□□□ 1.32
CHFR-217ENST00000540537 ZC3H11AO75152 810 aaKnown RBP eCLIP23.3■■□□□ 1.32
CHFR-217ENST00000540537 MED24O75448 989 aa23.3■■□□□ 1.32
CHFR-217ENST00000540537 AGMOQ6ZNB7 445 aa23.3■■□□□ 1.32
CHFR-217ENST00000540537 TMC7Q7Z402 723 aa23.3■■□□□ 1.32
CHFR-217ENST00000540537 CNNM3Q8NE01 707 aa23.3■■□□□ 1.32
CHFR-217ENST00000540537 TMEM169Q96HH4 297 aa23.3■■□□□ 1.32
CHFR-217ENST00000540537 NACC1Q96RE7 527 aa23.3■■□□□ 1.32
CHFR-217ENST00000540537 POP1Q99575 1024 aaKnown RBP23.3■■□□□ 1.32
CHFR-217ENST00000540537 POLR3FQ9H1D9 316 aaPredicted RBP23.3■■□□□ 1.32
CHFR-217ENST00000540537 BARX2Q9UMQ3 279 aaPredicted RBP23.3■■□□□ 1.32
CHFR-217ENST00000540537 INPP5FQ9Y2H2 1132 aa23.3■■□□□ 1.32
CHFR-217ENST00000540537 INO80B-WBP1J3KQ70 363 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 NCLP19338 710 aaKnown RBP23.29■■□□□ 1.32
CHFR-217ENST00000540537 GLRA2P23416 452 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 RPA1P27694 616 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 MBTD1Q05BQ5 628 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 NCBP1Q09161 790 aaKnown RBP23.29■■□□□ 1.32
CHFR-217ENST00000540537 NOTUMQ6P988 496 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 MCPH1Q8NEM0 835 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 URGCPQ8TCY9 931 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 NRDE2Q9H7Z3 1164 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 RSAD1Q9HA92 442 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 UPF2Q9HAU5 1272 aaKnown RBP23.29■■□□□ 1.32
CHFR-217ENST00000540537 KIF3AQ9Y496 699 aa23.29■■□□□ 1.32
CHFR-217ENST00000540537 A0A087WWV3 80 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 NT5C1B-RDH14C9J2C7 533 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 SRGAP2BP0DMP2 458 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 MUTP22033 750 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 FXR2P51116 673 aaKnown RBP eCLIP23.28■■□□□ 1.32
CHFR-217ENST00000540537 RNASELQ05823 741 aaKnown RBP23.28■■□□□ 1.32
CHFR-217ENST00000540537 SMC1AQ14683 1233 aaKnown RBP23.28■■□□□ 1.32
CHFR-217ENST00000540537 AMHR2Q16671 573 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 HAUS3Q68CZ6 603 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 TMEM184AQ6ZMB5 413 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 C4orf32Q8N8J7 132 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 VN1R2Q8NFZ6 395 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 UBN1Q9NPG3 1134 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 KANSL3Q9P2N6 904 aa23.28■■□□□ 1.32
CHFR-217ENST00000540537 HIDE1A8MVS5 230 aa23.27■■□□□ 1.32
CHFR-217ENST00000540537 GALTP07902 379 aa23.27■■□□□ 1.32
CHFR-217ENST00000540537 KCNC3Q14003 757 aa23.27■■□□□ 1.32
CHFR-217ENST00000540537 BMS1Q14692 1282 aaKnown RBP23.27■■□□□ 1.32
CHFR-217ENST00000540537 POTEGQ6S5H5 508 aa23.27■■□□□ 1.32
CHFR-217ENST00000540537 SMG8Q8ND04 991 aaKnown RBP23.27■■□□□ 1.32
CHFR-217ENST00000540537 IGSF21Q96ID5 467 aa23.27■■□□□ 1.32
CHFR-217ENST00000540537 C2orf71A6NGG8 1288 aa23.26■■□□□ 1.31
CHFR-217ENST00000540537 COL9A1P20849 921 aa23.26■■□□□ 1.31
CHFR-217ENST00000540537 NBR1Q14596 966 aa23.26■■□□□ 1.31
CHFR-217ENST00000540537 TMEM173Q86WV6 379 aaPredicted RBP23.26■■□□□ 1.31
CHFR-217ENST00000540537 MRPL43Q8N983 215 aaKnown RBP23.26■■□□□ 1.31
CHFR-217ENST00000540537 CPB2Q96IY4 423 aa23.26■■□□□ 1.31
CHFR-217ENST00000540537 EIF2AQ9BY44 585 aaKnown RBP23.26■■□□□ 1.31
CHFR-217ENST00000540537 CSRNP2Q9H175 543 aa23.26■■□□□ 1.31
CHFR-217ENST00000540537 GPRC5CQ9NQ84 441 aa23.26■■□□□ 1.31
CHFR-217ENST00000540537 IPPQ9Y573 584 aa23.26■■□□□ 1.31
CHFR-217ENST00000540537 ITGA4P13612 1032 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 ALADP13716 330 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 ARF4P18085 180 aaPredicted RBP23.25■■□□□ 1.31
CHFR-217ENST00000540537 SLC11A1P49279 550 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 TOB1P50616 345 aaPredicted RBP23.25■■□□□ 1.31
CHFR-217ENST00000540537 RBM10P98175 930 aaKnown RBP23.25■■□□□ 1.31
CHFR-217ENST00000540537 TMEM31Q5JXX7 168 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 DDX53Q86TM3 631 aaKnown RBP23.25■■□□□ 1.31
CHFR-217ENST00000540537 ZNF280BQ86YH2 543 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 TMX3Q96JJ7 454 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 TMEM175Q9BSA9 504 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 GBP3Q9H0R5 595 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 ZBP1Q9H171 429 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 DNAJB4Q9UDY4 337 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 USP15Q9Y4E8 981 aaPredicted RBP23.25■■□□□ 1.31
CHFR-217ENST00000540537 STK24Q9Y6E0 443 aa23.25■■□□□ 1.31
CHFR-217ENST00000540537 ARHGEF35A5YM69 484 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 INPPL1O15357 1258 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 GPR37L1O60883 481 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 PDIA5Q14554 519 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 CDCA2Q69YH5 1023 aaPredicted RBP23.24■■□□□ 1.31
CHFR-217ENST00000540537 PADI6Q6TGC4 694 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 MAEAQ7L5Y9 396 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 VPS52Q8N1B4 723 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 BCL7CQ8WUZ0 217 aaPredicted RBP23.24■■□□□ 1.31
CHFR-217ENST00000540537 RAB34Q9BZG1 259 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 STK39Q9UEW8 545 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 PCDHB6Q9Y5E3 794 aa23.24■■□□□ 1.31
CHFR-217ENST00000540537 LRRIQ4A6NIV6 560 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 LAD1O00515 517 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 B4GALT3O60512 393 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 DDHD2O94830 711 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 CYP11B2P19099 503 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 CCT6AP40227 531 aaKnown RBP23.23■■□□□ 1.31
CHFR-217ENST00000540537 MCM2P49736 904 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 AFF1P51825 1210 aaKnown RBP23.23■■□□□ 1.31
CHFR-217ENST00000540537 PTGDRQ13258 359 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 GIT2Q14161 759 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 ANKRD54Q6NXT1 300 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 PPP4R3CPQ6ZMV5 832 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 SUSD6Q92537 303 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 PRIMPOLQ96LW4 560 aa23.23■■□□□ 1.31
CHFR-217ENST00000540537 FAM193BQ96PV7 902 aaPredicted RBP23.23■■□□□ 1.31
CHFR-217ENST00000540537 LRFN3Q9BTN0 628 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms