RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 FAM163BP0C2L3 166 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 MAP2K2P36507 400 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 MAGEA1P43355 309 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 MYL7Q01449 175 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 SNAPC2Q13487 334 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 MAP4K3Q8IVH8 894 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 BSNDQ8WZ55 320 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 PCIF1Q9H4Z3 704 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 LUC7LQ9NQ29 371 aaKnown RBP10.49□□□□□ -0.73
CLIP1-212ENST00000540304 HSPBP1Q9NZL4 362 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 BZW2Q9Y6E2 419 aaKnown RBP10.49□□□□□ -0.73
CLIP1-212ENST00000540304 FAM170AA1A519 330 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 MACROD2A1Z1Q3 448 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 DENND3A2RUS2 1198 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 PJA2O43164 708 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 FARP2O94887 1054 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-212ENST00000540304 TRIM49P0CI25 452 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 TRIM49CP0CI26 452 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 TGFB3P10600 412 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 JAM2P57087 298 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 ARID5AQ03989 594 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 NEDD9Q14511 834 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 ZSCAN26Q16670 478 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 MTERF2Q49AM1 385 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 CBWD6Q4V339 395 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 CBWD3Q5JTY5 395 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 CBWD5Q5RIA9 395 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 MICALL1Q8N3F8 863 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 CEP112Q8N8E3 955 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 RDH13Q8NBN7 331 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 KIFC3Q9BVG8 833 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 XPNPEP1Q9NQW7 623 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 DAAM1Q9Y4D1 1078 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 DUSP10Q9Y6W6 482 aa10.49□□□□□ -0.73
CLIP1-212ENST00000540304 IGKV6D-21A0A0A0MT36 114 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 ABCD1P33897 745 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 GJA5P36382 358 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 VAMP7P51809 220 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 AMPD2Q01433 879 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 KCTD2Q14681 263 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 ENOX2Q16206 610 aaKnown RBP10.48□□□□□ -0.73
CLIP1-212ENST00000540304 SLC18A3Q16572 532 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 WHAMMP3Q1A5X7 153 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 Q3C1V9 767 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 IQCEQ6IPM2 695 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 IRF2BP2Q7Z5L9 587 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 SLC10A4Q96EP9 437 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 IFT74Q96LB3 600 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 MMP19Q99542 508 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 R3HDMLQ9H3Y0 253 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 MROH8Q9H579 483 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 ANO9A1A5B4 782 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 UNCXA6NJT0 531 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 H0YCG3 227 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 N4BP1O75113 896 aaKnown RBP10.48□□□□□ -0.73
CLIP1-212ENST00000540304 ATP4AP20648 1035 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 PRKCIP41743 596 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 POLGP54098 1239 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-212ENST00000540304 SOX10P56693 466 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 EMC2Q15006 297 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 NAIF1Q69YI7 327 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-212ENST00000540304 SRGAP1Q7Z6B7 1085 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 TRIM58Q8NG06 486 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 FGD4Q96M96 766 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 INTS2Q9H0H0 1204 aaKnown RBP10.48□□□□□ -0.73
CLIP1-212ENST00000540304 POLR3FQ9H1D9 316 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-212ENST00000540304 AJAP1Q9UKB5 411 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-212ENST00000540304 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
CLIP1-212ENST00000540304 DNAJC25-GNG10A0A024R161 153 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 GSTTP1A0A1W2PQM5 241 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 P4HA2O15460 535 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 GRIN3BO60391 1043 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 TACC1O75410 805 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 PGK2P07205 417 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 ANXA13P27216 316 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 TTC31Q49AM3 519 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-212ENST00000540304 FAM160B1Q5W0V3 765 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 KCNV1Q6PIU1 500 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 METTL7BQ6UX53 244 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 RSRC2Q7L4I2 434 aaKnown RBP10.47□□□□□ -0.73
CLIP1-212ENST00000540304 TRAPPC11Q7Z392 1133 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 GTF3C2Q8WUA4 911 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-212ENST00000540304 GOLGA1Q92805 767 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLIP1-212ENST00000540304 NIFKQ9BYG3 293 aaKnown RBP10.47□□□□□ -0.73
CLIP1-212ENST00000540304 CLEC11AQ9Y240 323 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 ZNFX1Q9P2E3 1918 aaKnown RBP10.47□□□□□ -0.73
CLIP1-212ENST00000540304 EMSYQ7Z589 1322 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 ADGRA3Q8IWK6 1321 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 SIP14410 1827 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 A0A087X0T9 212 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 ANKRD33BA6NCL7 494 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 ANKRD63C9JTQ0 380 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 ATP1A1P05023 1023 aaKnown RBP10.47□□□□□ -0.73
CLIP1-212ENST00000540304 FAM228BP0C875 321 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 FERP16591 822 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 RFX1P22670 979 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 CNGA1P29973 690 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 STAT1P42224 750 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 CHMP4BP1P59074 171 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms