RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MCM8Q9UJA3 840 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 PLXNB2O15031 1838 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 H0YHG0 523 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 M0R2N6 131 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 STRNO43815 780 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 SRGAP2O75044 1071 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 MBD4O95243 580 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 MYBP10242 640 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 TRIM21P19474 475 aaKnown RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 ANXA13P27216 316 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 CALRP27797 417 aaKnown RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 CCND3P30281 292 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 PPARAQ07869 468 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 TROAPQ12815 778 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 GRB14Q14449 540 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 CRYMQ14894 314 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 ZNF174Q15697 407 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 ASTE1Q2TB18 679 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 CCDC40Q4G0X9 1142 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 CCDC178Q5BJE1 867 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 CCDC181Q5TID7 509 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 NAA35Q5VZE5 725 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 OLFML2BQ68BL8 750 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 TATDN1Q6P1N9 297 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 CNNM4Q6P4Q7 775 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 PI16Q6UXB8 463 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 CATSPERGQ6ZRH7 1159 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 NLRP14Q86W24 1093 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 DAGLBQ8NCG7 672 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 ARRDC4Q8NCT1 418 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 ZNF473Q8WTR7 871 aaKnown RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 TGFBRAP1Q8WUH2 860 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 ANKS1AQ92625 1134 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 COL26A1Q96A83 441 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 ARL8AQ96BM9 186 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 LRRC45Q96CN5 670 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 GUCD1Q96NT3 240 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 ZIM3Q96PE6 472 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 ZSCAN10Q96SZ4 725 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 DUSP9Q99956 384 aaKnown RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 MYL10Q9BUA6 226 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 COL25A1Q9BXS0 654 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 MOV10L1Q9BXT6 1211 aaKnown RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 DISC1Q9NRI5 854 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 TOMM22Q9NS69 142 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 TRIM10Q9UDY6 481 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 TACC3Q9Y6A5 838 aa8.34□□□□□ -1.07
CCDC60-204ENST00000539847 V9GY48 417 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-204ENST00000539847 NCOR1O75376 2440 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 LAMA2P24043 3122 aaKnown RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 PVALEFA0A1B0GWK0 134 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 GMNCA6NCL1 334 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 ERVH48-1M5A8F1 160 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 ORC4O43929 436 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 NR1D1P20393 614 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 STAT6P42226 847 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 MAGEA1P43355 309 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 TDO2P48775 406 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 GNAQP50148 359 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CDR1P51861 262 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 SLC8A3P57103 927 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 TNNC1P63316 161 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 JAG1P78504 1218 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 SMAD3P84022 425 aaKnown RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 ATP2B2Q01814 1243 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 KCNC4Q03721 635 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 PSMD2Q13200 908 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 ITGB3BPQ13352 177 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 XRCC4Q13426 336 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 RIPK1Q13546 671 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 SNX17Q15036 470 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CCL14Q16627 93 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 PFKFB3Q16875 520 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 INTS6LQ5JSJ4 861 aaKnown RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 ZNF697Q5TEC3 545 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 FBXW10Q5XX13 1052 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CENPPQ6IPU0 288 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 C8orf74Q6P047 294 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CRELD2Q6UXH1 353 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 DTHD1Q6ZMT9 781 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CAPN12Q6ZSI9 719 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CCDC121Q6ZUS5 278 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CROCCP2Q86T23 111 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 IQCA1Q86XH1 822 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 SMYD4Q8IYR2 804 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 ABRAQ8N0Z2 381 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CSGALNACT2Q8N6G5 542 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 TSEN2Q8NCE0 465 aaKnown RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 SHCBP1Q8NEM2 672 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 GIMAP7Q8NHV1 300 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 MYCBPAPQ8TBZ2 947 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 PBKQ96KB5 322 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CAPZA3Q96KX2 299 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 TLR10Q9BXR5 811 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 IFIH1Q9BYX4 1025 aaKnown RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 LRRC27Q9C0I9 530 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 ISCUQ9H1K1 167 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 TMBIM4Q9HC24 238 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 SLC5A4Q9NY91 659 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms