RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 DCNP07585 359 aaKnown RBP8.41□□□□□ -1.06
GNE-205ENST00000539815 SIM2Q14190 667 aaPredicted RBP8.41□□□□□ -1.06
GNE-205ENST00000539815 LETM2Q2VYF4 491 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ZNF746Q6NUN9 644 aaPredicted RBP8.41□□□□□ -1.06
GNE-205ENST00000539815 ECHDC2Q86YB7 292 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 SP7Q8TDD2 431 aaPredicted RBP8.41□□□□□ -1.06
GNE-205ENST00000539815 KIF12Q96FN5 646 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 CHST12Q9NRB3 414 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 RPS6KL1Q9Y6S9 549 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 BAZ2BQ9UIF8 2168 aaKnown RBP8.41□□□□□ -1.06
GNE-205ENST00000539815 MAN2B1O00754 1011 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 EYA4O95677 639 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 PRKCEQ02156 737 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 MBTPS1Q14703 1052 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ARHGAP15Q53QZ3 475 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ICE2Q659A1 982 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 NCAPH2Q6IBW4 605 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 PDXDC1Q6P996 788 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ZNF852Q6ZMS4 543 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 MAEAQ7L5Y9 396 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 PRSS33Q8NF86 280 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ATL2Q8NHH9 583 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 WASF1Q92558 559 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ZHX3Q9H4I2 956 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ELAC1Q9H777 363 aaKnown RBP8.41□□□□□ -1.06
GNE-205ENST00000539815 PCDHGC5Q9Y5F6 944 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 PLXNA1Q9UIW2 1896 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 PRR23AA6NEV1 266 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 ASAP2O43150 1006 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 REC8O95072 547 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 OATP04181 439 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 SLFN14P0C7P3 912 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 FGFR4P22455 802 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 NOTUMQ6P988 496 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 RNF149Q8NC42 400 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 PI4K2BQ8TCG2 481 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 CLP1Q92989 425 aaKnown RBP8.4□□□□□ -1.06
GNE-205ENST00000539815 EPCAMP16422 314 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 AOC1P19801 751 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 CYP4A11Q02928 519 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 DAB2IPQ5VWQ8 1189 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 TPH2Q8IWU9 490 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 CCDC26Q8TAB7 109 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 RAB34Q9BZG1 259 aa8.4□□□□□ -1.06
GNE-205ENST00000539815 TOPORSQ9NS56 1045 aaPredicted RBP8.4□□□□□ -1.06
GNE-205ENST00000539815 A0A087WZ62 844 aa8.4□□□□□ -1.07
GNE-205ENST00000539815 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.4□□□□□ -1.07
GNE-205ENST00000539815 DCDC2BA2VCK2 349 aa8.4□□□□□ -1.07
GNE-205ENST00000539815 C5orf67F2Z3F1 127 aa8.4□□□□□ -1.07
GNE-205ENST00000539815 XPOTO43592 962 aaKnown RBP8.4□□□□□ -1.07
GNE-205ENST00000539815 CSDE1O75534 798 aaKnown RBP8.4□□□□□ -1.07
GNE-205ENST00000539815 PDGFBP01127 241 aaPredicted RBP8.4□□□□□ -1.07
GNE-205ENST00000539815 PLCB3Q01970 1234 aa8.4□□□□□ -1.07
GNE-205ENST00000539815 ZKSCAN8Q15776 578 aaPredicted RBP8.4□□□□□ -1.07
GNE-205ENST00000539815 ST3GAL2Q16842 350 aa8.4□□□□□ -1.07
GNE-205ENST00000539815 UAP1L1Q3KQV9 507 aa8.4□□□□□ -1.07
GNE-205ENST00000539815 PDZD4Q76G19 769 aaPredicted RBP8.4□□□□□ -1.07
GNE-205ENST00000539815 WNT8BQ93098 351 aa8.4□□□□□ -1.07
GNE-205ENST00000539815 FDXACB1Q9BRP7 624 aaPredicted RBP8.4□□□□□ -1.07
GNE-205ENST00000539815 KCNK12Q9HB15 430 aa8.4□□□□□ -1.07
GNE-205ENST00000539815 COL1A2P08123 1366 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 BRD1O95696 1058 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 SNHG28P0DPA3 235 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
GNE-205ENST00000539815 PPP2R5AQ15172 486 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 FAM171A1Q5VUB5 890 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 FOXD4L5Q5VV16 416 aaPredicted RBP8.39□□□□□ -1.07
GNE-205ENST00000539815 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 ASCL5Q7RTU5 278 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 FAM184AQ8NB25 1140 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 FOXD4L4Q8WXT5 416 aaPredicted RBP8.39□□□□□ -1.07
GNE-205ENST00000539815 KLHL5Q96PQ7 755 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 RIOX1Q9H6W3 641 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 ZFP14Q9HCL3 533 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 FAM105AQ9NUU6 356 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 THG1LQ9NWX6 298 aaKnown RBP8.39□□□□□ -1.07
GNE-205ENST00000539815 WNT16Q9UBV4 365 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 SLC8A2Q9UPR5 921 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 PCDHB9Q9Y5E1 797 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 ARHGEF35A5YM69 484 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 ATP9AO75110 1047 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 MYL4P12829 197 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 LRRC32Q14392 662 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 C1QTNF12Q5T7M4 302 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 IRF7Q92985 503 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 MCRS1Q96EZ8 462 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 JAKMIP1Q96N16 626 aaKnown RBP8.39□□□□□ -1.07
GNE-205ENST00000539815 RGS18Q9NS28 235 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 PCDHB15Q9Y5E8 787 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 SF3B1O75533 1304 aaKnown RBP eCLIP8.39□□□□□ -1.078e-6■■■■■ 107
GNE-205ENST00000539815 FASNP49327 2511 aaKnown RBP8.39□□□□□ -1.07
GNE-205ENST00000539815 GSTTP1A0A1W2PQM5 241 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 CCDC169A6NNP5 214 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 ZNF263O14978 683 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 SPTLC1O15269 473 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 CTSAP10619 480 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 TRIM21P19474 475 aaKnown RBP8.39□□□□□ -1.07
GNE-205ENST00000539815 TPRG1Q6ZUI0 275 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 NUDT18Q6ZVK8 323 aa8.39□□□□□ -1.07
GNE-205ENST00000539815 GAS2L3Q86XJ1 694 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms