RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 SRRTQ9BXP5 876 aaKnown RBP11.69□□□□□ -0.54
LEMD3-202ENST00000539442 RNF208Q9H0X6 261 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 AGPAT3Q9NRZ7 376 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 SAMSN1Q9NSI8 373 aaKnown RBP11.69□□□□□ -0.54
LEMD3-202ENST00000539442 OGDHLQ9ULD0 1010 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 PHF24Q9UPV7 400 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 A0A1W2PQ45 241 aaPredicted RBP11.68□□□□□ -0.54
LEMD3-202ENST00000539442 A0A1W2PQY0 241 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 K7ERI5 159 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 CETN3O15182 167 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 TREHO43280 583 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 TGFB1I1O43294 461 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 GNA14O95837 355 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 CDK11BP21127 795 aaKnown RBP11.68□□□□□ -0.54
LEMD3-202ENST00000539442 EEF1GP26641 437 aaKnown RBP11.68□□□□□ -0.54
LEMD3-202ENST00000539442 GPC3P51654 580 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 PTENP60484 403 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 ITGA7Q13683 1181 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 HIC1Q14526 733 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 MTFR1Q15390 333 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 TAS1R3Q7RTX0 852 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 RPAINQ86UA6 219 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 SLC9A9Q8IVB4 645 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 KSR1Q8IVT5 923 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 ANKRD20A12PQ8NF67 263 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 NLRP4Q96MN2 994 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 CCDC113Q9H0I3 377 aa11.68□□□□□ -0.54
LEMD3-202ENST00000539442 MAGEC2Q9UBF1 373 aaPredicted RBP11.68□□□□□ -0.54
LEMD3-202ENST00000539442 GRIN2DO15399 1336 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 A0A0U1RQG5 324 aaPredicted RBP11.67□□□□□ -0.54
LEMD3-202ENST00000539442 KCNJ18B7U540 433 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 KIAA0391O15091 583 aaKnown RBP11.67□□□□□ -0.54
LEMD3-202ENST00000539442 SLC16A3O15427 465 aaKnown RBP11.67□□□□□ -0.54
LEMD3-202ENST00000539442 VTNP04004 478 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 NR3C1P04150 777 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 SRGAP2CP0DJJ0 459 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 CAPN2P17655 700 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 NR2F2P24468 414 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 MARSP56192 900 aaKnown RBP11.67□□□□□ -0.54
LEMD3-202ENST00000539442 ADAM9Q13443 819 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 KCNJ12Q14500 433 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 HSP90AA2PQ14568 343 aaPredicted RBP11.67□□□□□ -0.54
LEMD3-202ENST00000539442 PCBP1Q15365 356 aaKnown RBP eCLIP11.67□□□□□ -0.54
LEMD3-202ENST00000539442 MAPK6Q16659 721 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 FAM187BQ17R55 369 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 TCP11X2Q5H9J9 407 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 FAM47CQ5HY64 1035 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 GDF6Q6KF10 455 aaPredicted RBP11.67□□□□□ -0.54
LEMD3-202ENST00000539442 ZPBP2Q6X784 338 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 RUFY4Q6ZNE9 571 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 FILIP1Q7Z7B0 1213 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 SLC43A3Q8NBI5 491 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 VTI1AQ96AJ9 217 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 CTAGE1Q96RT6 745 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 MKNK1Q9BUB5 465 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 STARD7Q9NQZ5 370 aa11.67□□□□□ -0.54
LEMD3-202ENST00000539442 PRMT7Q9NVM4 692 aaPredicted RBP11.67□□□□□ -0.54
LEMD3-202ENST00000539442 LIMA1Q9UHB6 759 aaKnown RBP11.67□□□□□ -0.54
LEMD3-202ENST00000539442 SIP14410 1827 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 A0A087WZ62 844 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 LRRC10BA6NIK2 292 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 ACKR2O00590 384 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 HNRNPDLO14979 420 aaKnown RBP11.66□□□□□ -0.54
LEMD3-202ENST00000539442 CBFA2T2O43439 604 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 SERPINC1P01008 464 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 PRKCBP05771 671 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 GJB1P08034 283 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 GARTP22102 1010 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 LIG4P49917 911 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 NLRP11P59045 1033 aaKnown RBP11.66□□□□□ -0.54
LEMD3-202ENST00000539442 ZNF200P98182 395 aaPredicted RBP11.66□□□□□ -0.54
LEMD3-202ENST00000539442 FANCCQ00597 558 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 PLCB2Q00722 1185 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 MBTD1Q05BQ5 628 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 SLFN12LQ6IEE8 588 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 ARMCX5Q6P1M9 558 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 SERINC5Q86VE9 423 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 IRF2BP1Q8IU81 584 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 DNAJB3Q8WWF6 145 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 BICD1Q96G01 975 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 CNOT6LQ96LI5 555 aaKnown RBP11.66□□□□□ -0.54
LEMD3-202ENST00000539442 PRIMPOLQ96LW4 560 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 FDXACB1Q9BRP7 624 aaPredicted RBP11.66□□□□□ -0.54
LEMD3-202ENST00000539442 MRPL4Q9BYD3 311 aaKnown RBP11.66□□□□□ -0.54
LEMD3-202ENST00000539442 GCOM2Q9BZD3 368 aaPredicted RBP11.66□□□□□ -0.54
LEMD3-202ENST00000539442 INO80BQ9C086 356 aaPredicted RBP11.66□□□□□ -0.54
LEMD3-202ENST00000539442 CRISPLD2Q9H0B8 497 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 FAM49AQ9H0Q0 323 aaPredicted RBP11.66□□□□□ -0.54
LEMD3-202ENST00000539442 ADAMTS10Q9H324 1103 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 FZD8Q9H461 694 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 IFT122Q9HBG6 1241 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 PRDM10Q9NQV6 1147 aa11.66□□□□□ -0.54
LEMD3-202ENST00000539442 DMAC2Q9NW81 257 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms