RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 NUP58Q9BVL2 599 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 NAA15Q9BXJ9 866 aaKnown RBP9.67□□□□□ -0.86
DDB1-213ENST00000539332 UBXN6Q9BZV1 441 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 SMARCAD1Q9H4L7 1026 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 TRMT1Q9NXH9 659 aaKnown RBP9.67□□□□□ -0.86
DDB1-213ENST00000539332 CAPN11Q9UMQ6 739 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 Q9Y3F1 56 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 TRIM17Q9Y577 477 aa9.67□□□□□ -0.86
DDB1-213ENST00000539332 TRIP12Q14669 1992 aaPredicted RBP9.66□□□□□ -0.86
DDB1-213ENST00000539332 A0A1W2PQJ5 194 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 K7ENM7 598 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 RNF225M0QZC1 329 aaPredicted RBP9.66□□□□□ -0.86
DDB1-213ENST00000539332 SEPT4O43236 478 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 DUSP11O75319 330 aaKnown RBP9.66□□□□□ -0.86
DDB1-213ENST00000539332 LGALS2P05162 132 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 ZNF286BP0CG31 522 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 SCP2P22307 547 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 RPL13P26373 211 aaKnown RBP9.66□□□□□ -0.86
DDB1-213ENST00000539332 MARK3P27448 753 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 CNGA1P29973 690 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 CASP14P31944 242 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 SLC26A2P50443 739 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 ADKP55263 362 aaKnown RBP9.66□□□□□ -0.86
DDB1-213ENST00000539332 DGKDQ16760 1214 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 ERCC6LQ2NKX8 1250 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 E4F1Q66K89 784 aaPredicted RBP9.66□□□□□ -0.86
DDB1-213ENST00000539332 TMEM161BQ8NDZ6 487 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 FAM167AQ96KS9 214 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 DNAJC7Q99615 494 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 C16orf70Q9BSU1 422 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 FAM117AQ9C073 453 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 GBP3Q9H0R5 595 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 ATP6V0A4Q9HBG4 840 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 GPRC5CQ9NQ84 441 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 AGPAT3Q9NRZ7 376 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 ERAP1Q9NZ08 941 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDB1-213ENST00000539332 FRMPD3Q5JV73 1810 aa9.66□□□□□ -0.86
DDB1-213ENST00000539332 TTC26A0AVF1 554 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 AKAP3O75969 853 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 CCND3P30281 292 aaPredicted RBP9.65□□□□□ -0.86
DDB1-213ENST00000539332 PLA2G4AP47712 749 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 NPTX2P47972 431 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 MEA1Q16626 185 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 CCDC40Q4G0X9 1142 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 FKBP15Q5T1M5 1219 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 SYT10Q6XYQ8 523 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 MAP4K3Q8IVH8 894 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 GPR161Q8N6U8 529 aaKnown RBP9.65□□□□□ -0.86
DDB1-213ENST00000539332 GOLGA6L1Q8N7Z2 621 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 SLAIN1Q8ND83 568 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 ATP8B4Q8TF62 1192 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 BSNDQ8WZ55 320 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 EXOC4Q96A65 974 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 ACCSQ96QU6 501 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 BAG1Q99933 345 aaPredicted RBP9.65□□□□□ -0.86
DDB1-213ENST00000539332 EDEM3Q9BZQ6 932 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 AP5M1Q9H0R1 490 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 RASSF4Q9H2L5 321 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 TMEM206Q9H813 350 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 METTL14Q9HCE5 456 aaKnown RBP9.65□□□□□ -0.86
DDB1-213ENST00000539332 NRBP2Q9NSY0 501 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 ABHD10Q9NUJ1 306 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 FEZ2Q9UHY8 353 aaPredicted RBP9.65□□□□□ -0.86
DDB1-213ENST00000539332 ANK1P16157 1881 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 SCN10AQ9Y5Y9 1956 aa9.65□□□□□ -0.86
DDB1-213ENST00000539332 MAPK13O15264 365 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 TADA3O75528 432 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 IVLP07476 585 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 CAPN2P17655 700 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 GRK4P32298 578 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 ABCD1P33897 745 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 RFC5P40937 340 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 CPT1AP50416 773 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 PEX3P56589 373 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 EMC2Q15006 297 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 PLCB4Q15147 1175 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 FSCN1Q16658 493 aaKnown RBP9.65□□□□□ -0.87
DDB1-213ENST00000539332 MTERF2Q49AM1 385 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 FAM102BQ5T8I3 360 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 HS2ST1Q7LGA3 356 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 HAUS6Q7Z4H7 955 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 IKZF4Q9H2S9 585 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 RNPEPQ9H4A4 650 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 ARHGAP28Q9P2N2 729 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 ARMCX3Q9UH62 379 aaPredicted RBP9.65□□□□□ -0.87
DDB1-213ENST00000539332 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.65□□□□□ -0.87
DDB1-213ENST00000539332 PTCH2Q9Y6C5 1203 aa9.65□□□□□ -0.87
DDB1-213ENST00000539332 ADGRA3Q8IWK6 1321 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 KIAA0100Q14667 2235 aaKnown RBP9.64□□□□□ -0.87
DDB1-213ENST00000539332 IGKV6-21A0A0C4DH24 114 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 ZBTB42B2RXF5 422 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 H3BRB1 525 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 SLC16A4O15374 487 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 INHAP05111 366 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 RARBP10826 455 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 EPB41P11171 864 aaKnown RBP9.64□□□□□ -0.87
DDB1-213ENST00000539332 HNRNPH3P31942 346 aaKnown RBP9.64□□□□□ -0.87
DDB1-213ENST00000539332 KRT9P35527 623 aa9.64□□□□□ -0.87
DDB1-213ENST00000539332 ARL2P36404 184 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms