RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TSPAN1O60635 241 aa24.69■■□□□ 1.54
SCARB1-206ENST00000539320 USO1O60763 962 aaKnown RBP24.69■■□□□ 1.54
SCARB1-206ENST00000539320 GPR37L1O60883 481 aa24.69■■□□□ 1.54
SCARB1-206ENST00000539320 ALADP13716 330 aa24.69■■□□□ 1.54
SCARB1-206ENST00000539320 ARL2P36404 184 aa24.69■■□□□ 1.54
SCARB1-206ENST00000539320 RBM25P49756 843 aaKnown RBP24.69■■□□□ 1.54
SCARB1-206ENST00000539320 TTC38Q5R3I4 469 aa24.69■■□□□ 1.54
SCARB1-206ENST00000539320 MRPL10Q7Z7H8 261 aaKnown RBP24.69■■□□□ 1.54
SCARB1-206ENST00000539320 TMEM173Q86WV6 379 aaPredicted RBP24.69■■□□□ 1.54
SCARB1-206ENST00000539320 CCDC51Q96ER9 411 aa24.69■■□□□ 1.54
SCARB1-206ENST00000539320 TUFT1Q9NNX1 390 aa24.69■■□□□ 1.54
SCARB1-206ENST00000539320 INO80B-WBP1J3KQ70 363 aa24.68■■□□□ 1.54
SCARB1-206ENST00000539320 SPATA31C1P0DKV0 1188 aa24.68■■□□□ 1.54
SCARB1-206ENST00000539320 XRCC6P12956 609 aaKnown RBP eCLIP24.68■■□□□ 1.54
SCARB1-206ENST00000539320 POU5F1BQ06416 359 aa24.68■■□□□ 1.54
SCARB1-206ENST00000539320 KCNC3Q14003 757 aa24.68■■□□□ 1.54
SCARB1-206ENST00000539320 ZNF174Q15697 407 aa24.68■■□□□ 1.54
SCARB1-206ENST00000539320 NOSTRINQ8IVI9 506 aa24.68■■□□□ 1.54
SCARB1-206ENST00000539320 ERMNQ8TAM6 284 aa24.68■■□□□ 1.54
SCARB1-206ENST00000539320 GBP3Q9H0R5 595 aa24.68■■□□□ 1.54
SCARB1-206ENST00000539320 POLR3FQ9H1D9 316 aaPredicted RBP24.68■■□□□ 1.54
SCARB1-206ENST00000539320 MED24O75448 989 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 GALTP07902 379 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 NCLP19338 710 aaKnown RBP24.67■■□□□ 1.54
SCARB1-206ENST00000539320 GLRA2P23416 452 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 AXLP30530 894 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 TRAPPC10P48553 1259 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 MBTD1Q05BQ5 628 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 BMS1Q14692 1282 aaKnown RBP24.67■■□□□ 1.54
SCARB1-206ENST00000539320 NOTUMQ6P988 496 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 TMEM184AQ6ZMB5 413 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 CATSPER3Q86XQ3 398 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 CNNM3Q8NE01 707 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 IGSF21Q96ID5 467 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 NFKBIZQ9BYH8 718 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 ZBP1Q9H171 429 aa24.67■■□□□ 1.54
SCARB1-206ENST00000539320 NOL7Q9UMY1 257 aaKnown RBP24.67■■□□□ 1.54
SCARB1-206ENST00000539320 A0A087WWV3 80 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 C2orf71A6NGG8 1288 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 CA8P35219 290 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 TECP42680 631 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 SLC11A1P49279 550 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 RABEP1Q15276 862 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 ANKRD54Q6NXT1 300 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 LLGL2Q6P1M3 1020 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 VPS52Q8N1B4 723 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 MRPL43Q8N983 215 aaKnown RBP24.66■■□□□ 1.54
SCARB1-206ENST00000539320 BCL7CQ8WUZ0 217 aaPredicted RBP24.66■■□□□ 1.54
SCARB1-206ENST00000539320 POLR3CQ9BUI4 534 aaPredicted RBP24.66■■□□□ 1.54
SCARB1-206ENST00000539320 DNAJB4Q9UDY4 337 aa24.66■■□□□ 1.54
SCARB1-206ENST00000539320 DBR1Q9UK59 544 aaKnown RBP24.66■■□□□ 1.54
SCARB1-206ENST00000539320 B4GALT3O60512 393 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 NCBP1Q09161 790 aaKnown RBP24.65■■□□□ 1.54
SCARB1-206ENST00000539320 AMHR2Q16671 573 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 POTEGQ6S5H5 508 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 SMG8Q8ND04 991 aaKnown RBP24.65■■□□□ 1.54
SCARB1-206ENST00000539320 MCPH1Q8NEM0 835 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 SUSD6Q92537 303 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 CASP10Q92851 521 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 CPB2Q96IY4 423 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 NACC1Q96RE7 527 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 EIF2AQ9BY44 585 aaKnown RBP24.65■■□□□ 1.54
SCARB1-206ENST00000539320 GPRC5CQ9NQ84 441 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 KANSL3Q9P2N6 904 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 IPPQ9Y573 584 aa24.65■■□□□ 1.54
SCARB1-206ENST00000539320 C5orf42Q9H799 3197 aa24.64■■□□□ 1.54
SCARB1-206ENST00000539320 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.64■■□□□ 1.54
SCARB1-206ENST00000539320 ITGA4P13612 1032 aa24.64■■□□□ 1.54
SCARB1-206ENST00000539320 HAUS3Q68CZ6 603 aa24.64■■□□□ 1.54
SCARB1-206ENST00000539320 DDX53Q86TM3 631 aaKnown RBP24.64■■□□□ 1.54
SCARB1-206ENST00000539320 ZNF280BQ86YH2 543 aa24.64■■□□□ 1.54
SCARB1-206ENST00000539320 TMEM175Q9BSA9 504 aa24.64■■□□□ 1.54
SCARB1-206ENST00000539320 PHF7Q9BWX1 381 aaPredicted RBP24.64■■□□□ 1.54
SCARB1-206ENST00000539320 CSRNP2Q9H175 543 aa24.64■■□□□ 1.54
SCARB1-206ENST00000539320 UBN1Q9NPG3 1134 aa24.64■■□□□ 1.54
SCARB1-206ENST00000539320 HCFC2Q9Y5Z7 792 aa24.64■■□□□ 1.54
SCARB1-206ENST00000539320 CTSAP10619 480 aa24.63■■□□□ 1.53
SCARB1-206ENST00000539320 HOXB8P17481 243 aaPredicted RBP24.63■■□□□ 1.53
SCARB1-206ENST00000539320 ARF4P18085 180 aaPredicted RBP24.63■■□□□ 1.53
SCARB1-206ENST00000539320 RPA1P27694 616 aa24.63■■□□□ 1.53
SCARB1-206ENST00000539320 AFF1P51825 1210 aaKnown RBP24.63■■□□□ 1.53
SCARB1-206ENST00000539320 SYCE2Q6PIF2 218 aa24.63■■□□□ 1.53
SCARB1-206ENST00000539320 MAEAQ7L5Y9 396 aa24.63■■□□□ 1.53
SCARB1-206ENST00000539320 FAM193BQ96PV7 902 aaPredicted RBP24.63■■□□□ 1.53
SCARB1-206ENST00000539320 LRRIQ4A6NIV6 560 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 PRR33A8MZF0 331 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 LOC730098B7Z3J9 87 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 ST18O60284 1047 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 CLASP2O75122 1294 aaKnown RBP24.62■■□□□ 1.53
SCARB1-206ENST00000539320 DDHD2O94830 711 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 CXCL14O95715 111 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 POMCP01189 267 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 U2AF2P26368 475 aaKnown RBP eCLIP24.62■■□□□ 1.53
SCARB1-206ENST00000539320 NBR1Q14596 966 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 RNF135Q8IUD6 432 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 AUTS2Q8WXX7 1259 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 TRIM6Q9C030 488 aaPredicted RBP24.62■■□□□ 1.53
SCARB1-206ENST00000539320 S1PR5Q9H228 398 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 MUTYHQ9UIF7 546 aa24.62■■□□□ 1.53
SCARB1-206ENST00000539320 HCN4Q9Y3Q4 1203 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms