RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 MXRA8Q9BRK3 442 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 HOMER2Q9NSB8 354 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 TTC7AQ9ULT0 858 aaPredicted RBP12.93□□□□□ -0.34
CPNE8-203ENST00000538596 ZHX2Q9Y6X8 837 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 UBE4BO95155 1302 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 CPP00450 1065 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 VCAM1P19320 739 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 MESDQ14696 234 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 QPCTQ16769 361 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 B4GALNT4Q76KP1 1039 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 KCTD17Q8N5Z5 321 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 MDM1Q8TC05 714 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 CHURC1Q8WUH1 139 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 CARD9Q9H257 536 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 VCPKMTQ9H867 229 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 TCRBV7S2A1N4TA0A589 114 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 C21orf2O43822 256 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 SF3B2Q13435 895 aaKnown RBP12.92□□□□□ -0.34
CPNE8-203ENST00000538596 DUPD1Q68J44 220 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 DEFB132Q7Z7B7 95 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 FAM84AQ96KN4 292 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 ERP44Q9BS26 406 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 FAM114A2Q9NRY5 505 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 ZNF70Q9UC06 446 aaPredicted RBP12.92□□□□□ -0.34
CPNE8-203ENST00000538596 DAAM1Q9Y4D1 1078 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 CAPN7Q9Y6W3 813 aa12.92□□□□□ -0.34
CPNE8-203ENST00000538596 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 SLC16A4O15374 487 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 MEFVO15553 781 aaPredicted RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 DHX15O43143 795 aaKnown RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 FAM107AO95990 144 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CALCAP01258 141 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 IFT88Q13099 833 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 RNF187Q5TA31 235 aaPredicted RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 NOP9Q86U38 636 aaKnown RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 JAMLQ86YT9 394 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 SLC9A9Q8IVB4 645 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CPXCR1Q8N123 301 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 OTUD6BQ8N6M0 293 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 UHMK1Q8TAS1 419 aaKnown RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 FBXO25Q8TCJ0 367 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 POP1Q99575 1024 aaKnown RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 KIFC3Q9BVG8 833 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 EPB41L4BQ9H329 900 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 ZDHHC18Q9NUE0 388 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 HSPBP1Q9NZL4 362 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 TMOD2Q9NZR1 351 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 KCND2Q9NZV8 630 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CCPG1Q9ULG6 757 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CNTNAP1P78357 1384 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 SMIM23A6NLE4 172 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CAND2O75155 1236 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CCDC172P0C7W6 258 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 BCRP11274 1271 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 COMTP21964 271 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 RARRES1P49788 294 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 PPP2R2AP63151 447 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 SETQ01105 290 aaPredicted RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 IFFO1Q0D2I5 559 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 MTMR3Q13615 1198 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 UGCGQ16739 394 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 TTC27Q6P3X3 843 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 RUFY4Q6ZNE9 571 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 SLC47A2Q86VL8 602 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CYFIP2Q96F07 1278 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CYP26A1O43174 497 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 PPFIA2O75334 1257 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 KIAA0754O94854 1291 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 ADRB2P07550 413 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CHRNB2P17787 502 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 PEX3P56589 373 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 MAP2K1Q02750 393 aaPredicted RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 EPC2Q52LR7 807 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 INTS8Q75QN2 995 aaKnown RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 PRELID2Q8N945 189 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 CCDC127Q96BQ5 260 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 SAAL1Q96ER3 474 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 TXLNGYQ9BZA5 131 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 TMEM117Q9H0C3 514 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 EHMT1Q9H9B1 1298 aa12.91□□□□□ -0.34
CPNE8-203ENST00000538596 LARSQ9P2J5 1176 aaKnown RBP12.91□□□□□ -0.34
CPNE8-203ENST00000538596 ZNF536O15090 1300 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 GOLGA6L10A0A0M3HER8 536 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 BIRC3Q13489 604 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 STYK1Q6J9G0 422 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 ZDHHC24Q6UX98 284 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 HAUS6Q7Z4H7 955 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 CBWD2Q8IUF1 395 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 PPM1KQ8N3J5 372 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 RAPGEF5Q92565 580 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 SEMA4DQ92854 862 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 KREMEN1Q96MU8 473 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 RIT2Q99578 217 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 RAB17Q9H0T7 212 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 TLDC2A0PJX2 215 aa12.9□□□□□ -0.34
CPNE8-203ENST00000538596 KIAA0391O15091 583 aaKnown RBP12.9□□□□□ -0.34
CPNE8-203ENST00000538596 P4HBP07237 508 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms