RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 RRP1BQ14684 758 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 MTFR1Q15390 333 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 VPS72Q15906 364 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 CGB2Q6NT52 195 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 BICDL1Q6ZP65 573 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 CCDC25Q86WR0 208 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 RHOT2Q8IXI1 618 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 DHX36Q9H2U1 1008 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 CDC42EP4Q9H3Q1 356 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 MLXIPLQ9NP71 852 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 TYW1Q9NV66 732 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 PASKQ96RG2 1323 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 LRRD1A4D1F6 860 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 USP17L5A8MUK1 530 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 AP1G2O75843 785 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 TTLL1O95922 423 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 ATP6V1C1P21283 382 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 PAPOLAP51003 745 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 C11orf63Q6NUN7 778 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 ECHDC2Q86YB7 292 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 ZDHHC14Q8IZN3 488 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 GDAP1Q8TB36 358 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 STK32AQ8WU08 396 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 TGFBRAP1Q8WUH2 860 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 MAGEB18Q96M61 343 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 RAB27AP51159 221 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 CYP1B1Q16678 543 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 MFN1Q8IWA4 741 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 PIGOQ8TEQ8 1089 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 CELF1Q92879 486 aaKnown RBP19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 ZSWIM1Q9BR11 485 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 PAPOLBQ9NRJ5 636 aaKnown RBP19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 CYP39A1Q9NYL5 469 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 JAG2Q9Y219 1238 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 NAV1Q8NEY1 1877 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 ANKRD63C9JTQ0 380 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 PEX11AO75192 247 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 NPTXRO95502 500 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 STX2P32856 288 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 CASP4P49662 377 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 CALCOCO2Q13137 446 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 DRAP1Q14919 205 aaPredicted RBP19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 PPP1R18Q6NYC8 613 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 MAEAQ7L5Y9 396 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 CCDC105Q8IYK2 499 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 AGGF1Q8N302 714 aaeCLIP19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 CCDC24Q8N4L8 307 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 NLRP3Q96P20 1036 aa19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 DDX23Q9BUQ8 820 aaKnown RBP19.97■□□□□ 0.79
SFSWAP-207ENST00000538548 BAG3O95817 575 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 GH1P01241 217 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 BRAFP15056 766 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 PCK1P35558 622 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 COILP38432 576 aaPredicted RBP19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 CDK8P49336 464 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 GIT2Q14161 759 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 MPP2Q14168 576 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 SGSM1Q2NKQ1 1148 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 SEL1L2Q5TEA6 688 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 ARHGEF18Q6ZSZ5 1173 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 SFR1Q86XK3 245 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 KRT35Q92764 455 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 CEP95Q96GE4 821 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 TULP1O00294 542 aaPredicted RBP19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 HGSO14964 777 aaPredicted RBP19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 SMIM24O75264 130 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 ACSL3O95573 720 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 TPBGLP0DKB5 382 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 CLK2P49760 499 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 RAD23BP54727 409 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 LBRQ14739 615 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 UBE2SQ16763 222 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 BMT2Q1RMZ1 405 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 CWF19L1Q69YN2 538 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 LINC00116Q8NCU8 138 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 ASTN1O14525 1302 aa19.96■□□□□ 0.79
SFSWAP-207ENST00000538548 TNFAIP3P21580 790 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 ROR2Q01974 943 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 ERFEQ4G0M1 354 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 C16orf86Q6ZW13 317 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 INTS8Q75QN2 995 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 CRAMP1Q96RY5 1269 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 TAS2R14Q9NYV8 317 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 CTNNAL1Q9UBT7 734 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 SAP30BPQ9UHR5 308 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 DNAJC12Q9UKB3 198 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 MTUS1Q9ULD2 1270 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 ZMYND8Q9ULU4 1186 aaPredicted RBP19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 MYH14Q7Z406 1995 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 EIF4E1BA6NMX2 242 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 EYA4O95677 639 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 MARCKSL1P49006 195 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 MXRA7P84157 204 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 SETDB1Q15047 1291 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 AMIGO3Q86WK7 504 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 ENDOVQ8N8Q3 282 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 TMEM237Q96Q45 408 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 NAP1L4Q99733 375 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 PTPN22Q9Y2R2 807 aa19.95■□□□□ 0.78
SFSWAP-207ENST00000538548 C10orf71Q711Q0 1435 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms