RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SEPT9Q9UHD8 586 aaPredicted RBP7.34□□□□□ -1.24
SORT1-209ENST00000538502 ADGRL3Q9HAR2 1447 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 GOLGA8SH3BPF8 625 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 TRIM66O15016 1216 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 APOA4P06727 396 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 NCAPHQ15003 741 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 RABGAP1LQ5R372 815 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 E4F1Q66K89 784 aaPredicted RBP7.33□□□□□ -1.24
SORT1-209ENST00000538502 METTL13Q8N6R0 699 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 SDR42E1Q8WUS8 393 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 CASP10Q92851 521 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 RMDN1Q96DB5 314 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 CEP95Q96GE4 821 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 LRRC1Q9BTT6 524 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 FAM192AQ9GZU8 254 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 PARVBQ9HBI1 364 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 ZFATQ9P243 1243 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 NCAPD2Q15021 1401 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 IQCA1LA6NCM1 817 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 ATP5BP06576 529 aaKnown RBP7.33□□□□□ -1.24
SORT1-209ENST00000538502 PSAPP07602 524 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 KRT17Q04695 432 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 SLC12A1Q13621 1099 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 RASGRF1Q13972 1273 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 EPS8L2Q9H6S3 715 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 CDV3Q9UKY7 258 aaKnown RBP7.33□□□□□ -1.24
SORT1-209ENST00000538502 LEMD3Q9Y2U8 911 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 SAMD9Q5K651 1589 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 MAP3K13O43283 966 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 COBLO75128 1261 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 NR3C1P04150 777 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 BTDP43251 543 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 RPS8P62241 208 aaKnown RBP7.33□□□□□ -1.24
SORT1-209ENST00000538502 HIF1AQ16665 826 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 DCLK2Q8N568 766 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 FRMD8Q9BZ67 464 aaPredicted RBP7.33□□□□□ -1.24
SORT1-209ENST00000538502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.33□□□□□ -1.241e-11■□□□□ 8.6
SORT1-209ENST00000538502 UVRAGQ9P2Y5 699 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 ZNF839A8K0R7 811 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 PPIP5K2O43314 1243 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 SRP72O76094 671 aaKnown RBP7.33□□□□□ -1.24
SORT1-209ENST00000538502 KITP10721 976 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 OSBPP22059 807 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 DAB2P98082 770 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 TNFAIP2Q03169 654 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 CENPCQ03188 943 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 GPS1Q13098 491 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 PFKFB3Q16875 520 aaPredicted RBP7.33□□□□□ -1.24
SORT1-209ENST00000538502 TRIM16LQ309B1 348 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 FAM47CQ5HY64 1035 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 CROCCP3Q8IVE0 287 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 OTUB1Q96FW1 271 aaPredicted RBP7.33□□□□□ -1.24
SORT1-209ENST00000538502 ACSBG1Q96GR2 724 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 TRIM62Q9BVG3 475 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 CARD9Q9H257 536 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 L2HGDHQ9H9P8 463 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 OLFML3Q9NRN5 406 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 TFCP2L1Q9NZI6 479 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 HACD3Q9P035 362 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 RUNX1T1Q06455 604 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 KCNH2Q12809 1159 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 IMPG1Q17R60 797 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 SYCP2LQ5T4T6 812 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 DCAF15Q66K64 600 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 DGKHQ86XP1 1220 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 ZBED8Q8IZ13 594 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 HSPH1Q92598 858 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 CHAMP1Q96JM3 812 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 WDR24Q96S15 920 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 FRMD8P1Q9BZ68 369 aaPredicted RBP7.33□□□□□ -1.24
SORT1-209ENST00000538502 LRRC4Q9HBW1 653 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 PARVAQ9NVD7 372 aa7.33□□□□□ -1.24
SORT1-209ENST00000538502 TTC26A0AVF1 554 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 ENO1P06733 434 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 NR5A1Q13285 461 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 KNOP1Q1ED39 458 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 ZBTB41Q5SVQ8 909 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 TRAF7Q6Q0C0 670 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 EFL1Q7Z2Z2 1120 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 JADE3Q92613 823 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 EME1Q96AY2 570 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 C19orf60Q96EN9 201 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 CATSPER2Q96P56 530 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 TIPINQ9BVW5 301 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 DLGAP2Q9P1A6 1054 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 MAP3K15Q6ZN16 1313 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 IGF2BP3O00425 579 aaKnown RBP eCLIP7.32□□□□□ -1.242e-6■■□□□ 14
SORT1-209ENST00000538502 KIAA0391O15091 583 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 TOM1O60784 492 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 MYO1DO94832 1006 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 PRLRP16471 622 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 CAPRIN1Q14444 709 aaKnown RBP7.32□□□□□ -1.24
SORT1-209ENST00000538502 KRT72Q14CN4 511 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 CYTH1Q15438 398 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 KBTBD12Q3ZCT8 623 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 LRRC31Q6UY01 552 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 GPR141Q7Z602 305 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 SNX19Q92543 992 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 APBB2Q92870 758 aa7.32□□□□□ -1.24
SORT1-209ENST00000538502 DDX47Q9H0S4 455 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms