RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 CCHCR1Q8TD31 782 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 PYROXD1Q8WU10 500 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 MAP3K14Q99558 947 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 VCX3BQ9H321 246 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 AGPAT5Q9NUQ2 364 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 SLC12A6Q9UHW9 1150 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 UBE4BO95155 1302 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 PFDN6O15212 129 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 HUS1O60921 280 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 GPC4O75487 556 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 DGAT1O75907 488 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 DPEP1P16444 411 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 GMPSP49915 693 aaPredicted RBP10.77□□□□□ -0.69
GGA3-201ENST00000537686 TNFAIP2Q03169 654 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 XKR3Q5GH77 459 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 E4F1Q66K89 784 aaPredicted RBP10.77□□□□□ -0.69
GGA3-201ENST00000537686 PDXDC1Q6P996 788 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 LMNTD2Q8IXW0 634 aa10.77□□□□□ -0.69
GGA3-201ENST00000537686 TCRBV5S4A2TA0A5A2 114 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 TYW5A2RUC4 315 aaKnown RBP10.76□□□□□ -0.69
GGA3-201ENST00000537686 PODXLO00592 558 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 TJP3O95049 919 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 TBXAS1P24557 533 aaPredicted RBP10.76□□□□□ -0.69
GGA3-201ENST00000537686 GNA15P30679 374 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 GPC3P51654 580 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 TFDP2Q14188 446 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 DUOXA2Q1HG44 320 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 ALS2CLQ60I27 953 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 TTC7AQ9ULT0 858 aaPredicted RBP10.76□□□□□ -0.69
GGA3-201ENST00000537686 HEY1Q9Y5J3 304 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 ESYT2A0FGR8 921 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 GNAT1P11488 350 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 BIRC2Q13490 618 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 COL9A3Q14050 684 aaPredicted RBP10.76□□□□□ -0.69
GGA3-201ENST00000537686 PLCB4Q15147 1175 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 FASTKD5Q7L8L6 764 aaKnown RBP10.76□□□□□ -0.69
GGA3-201ENST00000537686 GSPT2Q8IYD1 628 aaKnown RBP10.76□□□□□ -0.69
GGA3-201ENST00000537686 SKA2Q8WVK7 121 aaPredicted RBP10.76□□□□□ -0.69
GGA3-201ENST00000537686 TMEM143Q96AN5 459 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 RBM41Q96IZ5 413 aaKnown RBP10.76□□□□□ -0.69
GGA3-201ENST00000537686 PRMT6Q96LA8 375 aaPredicted RBP10.76□□□□□ -0.69
GGA3-201ENST00000537686 NUP85Q9BW27 656 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 GINM1Q9NU53 330 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 SRGAP2BP0DMP2 458 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 ACOT2P49753 483 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 CENPUQ71F23 418 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 GPD1LQ8N335 351 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 CFAP61Q8NHU2 1237 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 AGBL1Q96MI9 1066 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
GGA3-201ENST00000537686 IQCA1LA6NCM1 817 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 CALB1P05937 261 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 RPA1P27694 616 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 TM4SF1P30408 202 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 SOX5P35711 763 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 GYS2P54840 703 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 EIF3BP55884 814 aaKnown RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 PSMC1P62191 440 aaKnown RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 CCDC38Q502W7 563 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 GLE1Q53GS7 698 aaKnown RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 CC2D1AQ6P1N0 951 aaPredicted RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 POTEAQ6S8J7 498 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 SPATS2Q86XZ4 545 aaKnown RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 SCN4BQ8IWT1 228 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 ACER1Q8TDN7 264 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 RFFLQ8WZ73 363 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 NUF2Q9BZD4 464 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 FAM217BQ9NTX9 383 aaPredicted RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 IPO11Q9UI26 975 aaKnown RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 WDR91A4D1P6 747 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 C19orf81C9J6K1 198 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 ONECUT3O60422 494 aaPredicted RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 ATP1A1P05023 1023 aaKnown RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 NPEPPSP55786 919 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 STYK1Q6J9G0 422 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 BEST2Q8NFU1 509 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 EXOC4Q96A65 974 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 ATG4CQ96DT6 458 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 COL18A1P39060 1754 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 CYP26A1O43174 497 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 SMARCA1P28370 1054 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 SDC4P31431 198 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 CCZ1BP86790 482 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 CCZ1P86791 482 aaPredicted RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 HDLBPQ00341 1268 aaKnown RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 ASPHQ12797 758 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 WDR72Q3MJ13 1102 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 ZC2HC1CQ53FD0 456 aaPredicted RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 PLA2G4FQ68DD2 849 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 MYLK4Q86YV6 388 aaPredicted RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 RYBPQ8N488 228 aaPredicted RBP10.75□□□□□ -0.69
GGA3-201ENST00000537686 SEPT1Q8WYJ6 367 aa10.75□□□□□ -0.69
GGA3-201ENST00000537686 ASB14A6NK59 587 aa10.74□□□□□ -0.69
GGA3-201ENST00000537686 RCN2Q14257 317 aa10.74□□□□□ -0.69
GGA3-201ENST00000537686 PTPAQ15257 358 aa10.74□□□□□ -0.69
GGA3-201ENST00000537686 ARL13BQ3SXY8 428 aa10.74□□□□□ -0.69
GGA3-201ENST00000537686 HDAC11Q96DB2 347 aa10.74□□□□□ -0.69
GGA3-201ENST00000537686 KCNF1Q9H3M0 494 aa10.74□□□□□ -0.69
GGA3-201ENST00000537686 SAYSD1Q9NPB0 183 aa10.74□□□□□ -0.69
GGA3-201ENST00000537686 MYOZ2Q9NPC6 264 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms