RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 MEIS2O14770 477 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 CLIC2O15247 247 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 FAM13AO94988 1023 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 PLTPP55058 493 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 CERKLQ49MI3 558 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-218ENST00000537641 PRR16Q569H4 304 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 SEL1L2Q5TEA6 688 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 TATDN1Q6P1N9 297 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 TLDC1Q6P9B6 456 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 STXBP4Q6ZWJ1 553 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 CYFIP1Q7L576 1253 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 LENG9Q96B70 501 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 RPS6KC1Q96S38 1066 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 RUSC1Q9BVN2 902 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 BHMT2Q9H2M3 363 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 NOD2Q9HC29 1040 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 VAV3Q9UKW4 847 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 SNX24Q9Y343 169 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-218ENST00000537641 DDTLA6NHG4 134 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-218ENST00000537641 ATP2C2O75185 946 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 MTA2O94776 668 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 RARGP13631 454 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 EEF2P13639 858 aaKnown RBP13.1□□□□□ -0.31
CPSF7-218ENST00000537641 KRT13P13646 458 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 ABCB4P21439 1286 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 RBM5P52756 815 aaKnown RBP eCLIP13.1□□□□□ -0.31
CPSF7-218ENST00000537641 MYL7Q01449 175 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 CYP1B1Q16678 543 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 TRPM8Q7Z2W7 1104 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 CEP57Q86XR8 500 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 CNKSR1Q969H4 720 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 ZSWIM1Q9BR11 485 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 THAP2Q9H0W7 228 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 TUFT1Q9NNX1 390 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 DMAC2Q9NW81 257 aa13.1□□□□□ -0.31
CPSF7-218ENST00000537641 OPLAHO14841 1288 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 OAS1P00973 400 aaKnown RBP13.09□□□□□ -0.31
CPSF7-218ENST00000537641 MUTP22033 750 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 RPL21P46778 160 aaKnown RBP13.09□□□□□ -0.31
CPSF7-218ENST00000537641 ZNF131P52739 623 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 CACNB3P54284 484 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 TCP10Q12799 353 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 ZNF211Q13398 564 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-218ENST00000537641 MYBPC2Q14324 1141 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 SLC29A2Q14542 456 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 CRYMQ14894 314 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 PPP1R7Q15435 360 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 SLFN13Q68D06 897 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 RINT1Q6NUQ1 792 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-218ENST00000537641 TMEM179Q6ZVK1 233 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 SH3BP5LQ7L8J4 393 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 TEX2Q8IWB9 1127 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 PRELID2Q8N945 189 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 ALG3Q92685 438 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 HOOK2Q96ED9 719 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 AGPAT1Q99943 283 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 EIF2AK1Q9BQI3 630 aaKnown RBP13.09□□□□□ -0.31
CPSF7-218ENST00000537641 PLCD4Q9BRC7 762 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 HOMER3Q9NSC5 361 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 SUFUQ9UMX1 484 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 FRMD4BQ9Y2L6 1034 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 ALG6Q9Y672 507 aa13.09□□□□□ -0.31
CPSF7-218ENST00000537641 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.31
CPSF7-218ENST00000537641 TLDC2A0PJX2 215 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 RIPK2O43353 540 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 CYP3A4P08684 503 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 ATP5DP30049 168 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 PDE6CP51160 858 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 CTTNQ14247 550 aaKnown RBP13.08□□□□□ -0.32
CPSF7-218ENST00000537641 CNGA2Q16280 664 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 TRMT10CQ7L0Y3 403 aaKnown RBP13.08□□□□□ -0.32
CPSF7-218ENST00000537641 HS2ST1Q7LGA3 356 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 SLC9A9Q8IVB4 645 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 C12orf50Q8NA57 414 aaPredicted RBP13.08□□□□□ -0.32
CPSF7-218ENST00000537641 GLG1Q92896 1179 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 ART4Q93070 314 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 AMNQ9BXJ7 453 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 WNT8AQ9H1J5 351 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 EBF2Q9HAK2 575 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 PARVGQ9HBI0 331 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 MTUS1Q9ULD2 1270 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 COG5Q9UP83 839 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 PCDHA3Q9Y5H8 950 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 PCDHAC2Q9Y5I4 1007 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 PASKQ96RG2 1323 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 RASGRF2O14827 1237 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 MSH4O15457 936 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 P4HA2O15460 535 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 ENTPD3O75355 529 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 VIMP08670 466 aaKnown RBP13.08□□□□□ -0.32
CPSF7-218ENST00000537641 BCRP11274 1271 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 SLC8A3P57103 927 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 PPARDQ03181 441 aa13.08□□□□□ -0.32
CPSF7-218ENST00000537641 ICA1Q05084 483 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms