RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 RAD51AP2Q09MP3 1159 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 PPP2R5AQ15172 486 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 MRPL10Q7Z7H8 261 aaKnown RBP19.13■□□□□ 0.65
GPN3-202ENST00000537466 KLHL23Q8NBE8 558 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 SMG8Q8ND04 991 aaKnown RBP19.13■□□□□ 0.65
GPN3-202ENST00000537466 SLC17A8Q8NDX2 589 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 DEPTORQ8TB45 409 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 P2RX5Q93086 422 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 MRPL38Q96DV4 380 aaKnown RBP19.13■□□□□ 0.65
GPN3-202ENST00000537466 IFT74Q96LB3 600 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 CCSER1Q9C0I3 900 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 CCDC113Q9H0I3 377 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 FZD8Q9H461 694 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 ALG13Q9NP73 1137 aaKnown RBP19.13■□□□□ 0.65
GPN3-202ENST00000537466 BLOC1S4Q9NUP1 217 aa19.13■□□□□ 0.65
GPN3-202ENST00000537466 ITGB1P05556 798 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 GUCY2CP25092 1073 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 FAM187BQ17R55 369 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 FOXD4L6Q3SYB3 417 aaPredicted RBP19.12■□□□□ 0.65
GPN3-202ENST00000537466 FOXD4L3Q6VB84 417 aaPredicted RBP19.12■□□□□ 0.65
GPN3-202ENST00000537466 PPP4R3CPQ6ZMV5 832 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 AGMOQ6ZNB7 445 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 LRRC43Q8N309 656 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 COLGALT1Q8NBJ5 622 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 SYMPKQ92797 1274 aaKnown RBP19.12■□□□□ 0.65
GPN3-202ENST00000537466 C2orf40Q9H1Z8 148 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 PRMT7Q9NVM4 692 aaPredicted RBP19.12■□□□□ 0.65
GPN3-202ENST00000537466 PLAGL2Q9UPG8 496 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 USP20Q9Y2K6 914 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 MORC2Q9Y6X9 1032 aaPredicted RBP19.12■□□□□ 0.65
GPN3-202ENST00000537466 TCHHQ07283 1943 aa19.12■□□□□ 0.65
GPN3-202ENST00000537466 NPHP3-ACAD11A0A0J9YXS1 232 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 SFI1A8K8P3 1242 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 OFD1O75665 1012 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 PDIA4P13667 645 aaKnown RBP19.11■□□□□ 0.65
GPN3-202ENST00000537466 LIG1P18858 919 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 NCLP19338 710 aaKnown RBP19.11■□□□□ 0.65
GPN3-202ENST00000537466 DNAJB1P25685 340 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 PEX3P56589 373 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 CACNB1Q02641 598 aaPredicted RBP19.11■□□□□ 0.65
GPN3-202ENST00000537466 NCBP1Q09161 790 aaKnown RBP19.11■□□□□ 0.65
GPN3-202ENST00000537466 ARSHQ5FYA8 562 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.11■□□□□ 0.65
GPN3-202ENST00000537466 LINC00301Q8NCQ3 95 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 RASSF8Q8NHQ8 419 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 PGBD4Q96DM1 585 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 CCDC51Q96ER9 411 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 PRIMPOLQ96LW4 560 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 DRC1Q96MC2 740 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 HES2Q9Y543 173 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 IPPQ9Y573 584 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 TRIP11Q15643 1979 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 CNTNAP2Q9UHC6 1331 aa19.11■□□□□ 0.65
GPN3-202ENST00000537466 A0A1B0GUA9 196 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 CCDC169A6NNP5 214 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 CSPG5O95196 566 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 PRKCBP05771 671 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 PBX3P40426 434 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 NPTX2P47972 431 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 AFF1P51825 1210 aaKnown RBP19.1■□□□□ 0.65
GPN3-202ENST00000537466 CAMK1Q14012 370 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 DHX8Q14562 1220 aaKnown RBP19.1■□□□□ 0.65
GPN3-202ENST00000537466 MCM6Q14566 821 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 STK38Q15208 465 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 MAPK6Q16659 721 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 PTPROQ16827 1216 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 KRI1Q8N9T8 703 aaKnown RBP19.1■□□□□ 0.65
GPN3-202ENST00000537466 SPPL3Q8TCT6 385 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 RAD54LQ92698 747 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 ZNF396Q96N95 335 aaPredicted RBP19.1■□□□□ 0.65
GPN3-202ENST00000537466 RNF39Q9H2S5 420 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 INPP5FQ9Y2H2 1132 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 PCDHB12Q9Y5F1 795 aa19.1■□□□□ 0.65
GPN3-202ENST00000537466 SPTBN5Q9NRC6 3674 aaKnown RBP19.1■□□□□ 0.65
GPN3-202ENST00000537466 NPTXRO95502 500 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 LAG3P18627 525 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 PRPF4BQ13523 1007 aaKnown RBP19.09■□□□□ 0.65
GPN3-202ENST00000537466 SKIV2LQ15477 1246 aaKnown RBP19.09■□□□□ 0.65
GPN3-202ENST00000537466 NAALADL2Q58DX5 795 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 SLC27A1Q6PCB7 646 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 GLB1LQ6UWU2 654 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 TIPINQ9BVW5 301 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 MRPL9Q9BYD2 267 aaKnown RBP19.09■□□□□ 0.65
GPN3-202ENST00000537466 NXF3Q9H4D5 531 aaKnown RBP19.09■□□□□ 0.65
GPN3-202ENST00000537466 RSAD1Q9HA92 442 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 AAASQ9NRG9 546 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 TBC1D13Q9NVG8 400 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 KCND2Q9NZV8 630 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 XIRP2A4UGR9 3374 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 ACKR2O00590 384 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 ITGA4P13612 1032 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 EFNA5P52803 228 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 DMP1Q13316 513 aaPredicted RBP19.09■□□□□ 0.65
GPN3-202ENST00000537466 NOMO2Q5JPE7 1267 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 KCNT2Q6UVM3 1135 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 GPBP1Q86WP2 473 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 CNNM3Q8NE01 707 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 TRIM6Q9C030 488 aaPredicted RBP19.09■□□□□ 0.65
GPN3-202ENST00000537466 LMAN2LQ9H0V9 348 aa19.09■□□□□ 0.65
GPN3-202ENST00000537466 PDZD7Q9H5P4 517 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms