RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 PTPREP23469 700 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 CCT3P49368 545 aaKnown RBP12.52□□□□□ -0.41
POLR1B-216ENST00000537335 TRMT5Q32P41 509 aaKnown RBP12.52□□□□□ -0.41
POLR1B-216ENST00000537335 ARMCX4Q5H9R4 360 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 SEPT1Q8WYJ6 367 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 BRIP1Q9BX63 1249 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 ASPSCR1Q9BZE9 553 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 C14orf93Q9H972 538 aaKnown RBP12.52□□□□□ -0.41
POLR1B-216ENST00000537335 ZNF180Q9UJW8 692 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 PRAG1Q86YV5 1406 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 A0A1B0GTH6 734 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 SMIM31A0A1B0GVY4 71 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 ARHGEF37A1IGU5 675 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 FAM25AB3EWG3 89 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 FAM25CB3EWG5 89 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 FAM25GB3EWG6 89 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 RAD51CO43502 376 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 KRT19P08727 400 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 FCHO2Q0JRZ9 810 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 PRPF39Q86UA1 669 aaKnown RBP12.52□□□□□ -0.41
POLR1B-216ENST00000537335 TCAIMQ8N3R3 496 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 EAF2Q96CJ1 260 aaPredicted RBP12.52□□□□□ -0.41
POLR1B-216ENST00000537335 DCUN1D5Q9BTE7 237 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 ATP8A2Q9NTI2 1148 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 SAC3D1A6NKF1 404 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 FGAP02671 866 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 MYBPC2Q14324 1141 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 IZUMO3Q5VZ72 239 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 LRRC74BQ6ZQY2 392 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 AGAP11Q8TF27 550 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 CHP1Q99653 195 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 CALN1Q9BXU9 219 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 RAB21Q9UL25 225 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 UBE4BO95155 1302 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 ALBP02768 609 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 KCNA2P16389 499 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 DNAJC3Q13217 504 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 DMC1Q14565 340 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 CCDC153Q494R4 210 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
POLR1B-216ENST00000537335 CEP44Q9C0F1 390 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 EXOSC4Q9NPD3 245 aaKnown RBP12.51□□□□□ -0.41
POLR1B-216ENST00000537335 GOLGA8MH3BSY2 632 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 YWHAHQ04917 246 aaPredicted RBP12.51□□□□□ -0.41
POLR1B-216ENST00000537335 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
POLR1B-216ENST00000537335 FAF2Q96CS3 445 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 RBM41Q96IZ5 413 aaKnown RBP12.51□□□□□ -0.41
POLR1B-216ENST00000537335 TTC7AQ9ULT0 858 aaPredicted RBP12.51□□□□□ -0.41
POLR1B-216ENST00000537335 SOX13Q9UN79 622 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 ZNF532Q9HCE3 1301 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 ALDH5A1P51649 535 aaPredicted RBP12.51□□□□□ -0.41
POLR1B-216ENST00000537335 PLEKHM3Q6ZWE6 761 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 KRT26Q7Z3Y9 468 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 TTC13Q8NBP0 860 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 ASZ1Q8WWH4 475 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 JADE3Q92613 823 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 GGA2Q9UJY4 613 aa12.51□□□□□ -0.41
POLR1B-216ENST00000537335 TRIM24O15164 1050 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 TTLL1O95922 423 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 ZBED1O96006 694 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 DNAJC24Q6P3W2 148 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 CCNYL1Q8N7R7 359 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 TMA16Q96EY4 203 aaKnown RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 RNPEPL1Q9HAU8 725 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 CC2D2AQ9P2K1 1620 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 AIM2O14862 343 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 KRT16P08779 473 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 COPAP53621 1224 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 GPC5P78333 572 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 SP4Q02446 784 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 SETD3Q86TU7 594 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 CDAN1Q8IWY9 1227 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 C4orf33Q8N1A6 199 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 RIBC1Q8N443 379 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 VPS39Q96JC1 886 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 CLEC4MQ9H2X3 399 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 EPS8L2Q9H6S3 715 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 BABAM1Q9NWV8 329 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 PCDHB6Q9Y5E3 794 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 GOLGA8TH3BQL2 631 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 K7ENM7 598 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 HOXB7P09629 217 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 DLATP10515 647 aaKnown RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 CDH3P22223 829 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 DDX17Q92841 729 aaKnown RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 GLMNQ92990 594 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 TRIM51Q9BSJ1 452 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 FANCEQ9HB96 536 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 UBE2TQ9NPD8 197 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 C20orf96Q9NUD7 363 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 C6orf203Q9P0P8 240 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 SYNJ2O15056 1496 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 ITIH6Q6UXX5 1313 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 SMARCA1P28370 1054 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms