RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 DLGAP2Q9P1A6 1054 aa15.07■□□□□ 0
LIG1-203ENST00000536218 SHBGP04278 402 aa15.07■□□□□ 0
LIG1-203ENST00000536218 CHN1P15882 459 aa15.07■□□□□ 0
LIG1-203ENST00000536218 RASA3Q14644 834 aa15.07■□□□□ 0
LIG1-203ENST00000536218 CIAPIN1Q6FI81 312 aa15.07■□□□□ 0
LIG1-203ENST00000536218 CPXCR1Q8N123 301 aa15.07■□□□□ 0
LIG1-203ENST00000536218 GUF1Q8N442 669 aaKnown RBP15.07■□□□□ 0
LIG1-203ENST00000536218 ETNPPLQ8TBG4 499 aa15.07■□□□□ 0
LIG1-203ENST00000536218 LRRC27Q9C0I9 530 aa15.07■□□□□ 0
LIG1-203ENST00000536218 BCAS3Q9H6U6 928 aa15.07■□□□□ 0
LIG1-203ENST00000536218 LRRC4CQ9HCJ2 640 aa15.07■□□□□ 0
LIG1-203ENST00000536218 PKD2L1Q9P0L9 805 aa15.07■□□□□ 0
LIG1-203ENST00000536218 GJA3Q9Y6H8 435 aa15.07■□□□□ 0
LIG1-203ENST00000536218 A0A1W2PQC6 194 aa15.06■□□□□ 0
LIG1-203ENST00000536218 H0YGN5 161 aa15.06■□□□□ 0
LIG1-203ENST00000536218 FOSP01100 380 aaPredicted RBP15.06■□□□□ 0
LIG1-203ENST00000536218 CAP2P40123 477 aa15.06■□□□□ 0
LIG1-203ENST00000536218 RFC5P40937 340 aa15.06■□□□□ 0
LIG1-203ENST00000536218 ERVK-9P63128 1117 aa15.06■□□□□ 0
LIG1-203ENST00000536218 ADAM9Q13443 819 aa15.06■□□□□ 0
LIG1-203ENST00000536218 MIIPQ5JXC2 388 aa15.06■□□□□ 0
LIG1-203ENST00000536218 BTNL9Q6UXG8 535 aa15.06■□□□□ 0
LIG1-203ENST00000536218 NCAPG2Q86XI2 1143 aa15.06■□□□□ 0
LIG1-203ENST00000536218 TEX9Q8N6V9 391 aa15.06■□□□□ 0
LIG1-203ENST00000536218 DYDC1Q8WWB3 177 aa15.06■□□□□ 0
LIG1-203ENST00000536218 LENG9Q96B70 501 aa15.06■□□□□ 0
LIG1-203ENST00000536218 NOX5Q96PH1 765 aa15.06■□□□□ 0
LIG1-203ENST00000536218 ZNF341Q9BYN7 854 aa15.06■□□□□ 0
LIG1-203ENST00000536218 FAM129AQ9BZQ8 928 aa15.06■□□□□ 0
LIG1-203ENST00000536218 BCS1LQ9Y276 419 aa15.06■□□□□ 0
LIG1-203ENST00000536218 NFS1Q9Y697 457 aa15.06■□□□□ 0
LIG1-203ENST00000536218 KDM3AQ9Y4C1 1321 aa15.06■□□□□ 0
LIG1-203ENST00000536218 CYP3A7-CYP3A51PA0A087WV96 503 aa15.06■□□□□ 0
LIG1-203ENST00000536218 FAM163BP0C2L3 166 aa15.06■□□□□ 0
LIG1-203ENST00000536218 CYP11B2P19099 503 aa15.06■□□□□ 0
LIG1-203ENST00000536218 CYP3A7P24462 503 aa15.06■□□□□ 0
LIG1-203ENST00000536218 FLT3P36888 993 aa15.06■□□□□ 0
LIG1-203ENST00000536218 SREBF1P36956 1147 aa15.06■□□□□ 0
LIG1-203ENST00000536218 MSH2P43246 934 aa15.06■□□□□ 0
LIG1-203ENST00000536218 EHHADHQ08426 723 aa15.06■□□□□ 0
LIG1-203ENST00000536218 ERMARDQ5T6L9 678 aa15.06■□□□□ 0
LIG1-203ENST00000536218 CCDC113Q9H0I3 377 aa15.06■□□□□ 0
LIG1-203ENST00000536218 MYOZ2Q9NPC6 264 aa15.06■□□□□ 0
LIG1-203ENST00000536218 PCMTD2Q9NV79 361 aa15.06■□□□□ 0
LIG1-203ENST00000536218 GREB1LQ9C091 1923 aaPredicted RBP15.06■□□□□ 0
LIG1-203ENST00000536218 PAEPP09466 180 aa15.06■□□□□ 0
LIG1-203ENST00000536218 TRMT1LQ7Z2T5 733 aaKnown RBP15.06■□□□□ 0
LIG1-203ENST00000536218 SAMD7Q7Z3H4 446 aa15.06■□□□□ 0
LIG1-203ENST00000536218 CCDC65Q8IXS2 484 aa15.06■□□□□ 0
LIG1-203ENST00000536218 PIGOQ8TEQ8 1089 aa15.06■□□□□ 0
LIG1-203ENST00000536218 CHURC1Q8WUH1 139 aa15.06■□□□□ 0
LIG1-203ENST00000536218 TSG101Q99816 390 aa15.06■□□□□ 0
LIG1-203ENST00000536218 HOMER2Q9NSB8 354 aa15.06■□□□□ 0
LIG1-203ENST00000536218 WDR35Q9P2L0 1181 aa15.06■□□□□ 0
LIG1-203ENST00000536218 DNM3Q9UQ16 869 aa15.06■□□□□ 0
LIG1-203ENST00000536218 C10orf71Q711Q0 1435 aa15.05■□□□□ 0
LIG1-203ENST00000536218 ASTN2O75129 1339 aaPredicted RBP15.05■□□□□ -0
LIG1-203ENST00000536218 SFI1A8K8P3 1242 aa15.05■□□□□ -0
LIG1-203ENST00000536218 EML1O00423 815 aa15.05■□□□□ -0
LIG1-203ENST00000536218 RARAP10276 462 aa15.05■□□□□ -0
LIG1-203ENST00000536218 PPP1R2P41236 205 aa15.05■□□□□ -0
LIG1-203ENST00000536218 TNNC1P63316 161 aa15.05■□□□□ -0
LIG1-203ENST00000536218 CTTNQ14247 550 aaKnown RBP15.05■□□□□ -0
LIG1-203ENST00000536218 ENOX2Q16206 610 aaKnown RBP15.05■□□□□ -0
LIG1-203ENST00000536218 DALRD3Q5D0E6 543 aaKnown RBP15.05■□□□□ -0
LIG1-203ENST00000536218 KLHDC7AQ5VTJ3 777 aa15.05■□□□□ -0
LIG1-203ENST00000536218 CACNA2D4Q7Z3S7 1137 aa15.05■□□□□ -0
LIG1-203ENST00000536218 FBF1Q8TES7 1133 aa15.05■□□□□ -0
LIG1-203ENST00000536218 AGBL1Q96MI9 1066 aa15.05■□□□□ -0
LIG1-203ENST00000536218 UBE2OQ9C0C9 1292 aaKnown RBP15.05■□□□□ -0
LIG1-203ENST00000536218 MTFR1LQ9H019 292 aa15.05■□□□□ -0
LIG1-203ENST00000536218 TAOK3Q9H2K8 898 aa15.05■□□□□ -0
LIG1-203ENST00000536218 ZMYND8Q9ULU4 1186 aaPredicted RBP15.05■□□□□ -0
LIG1-203ENST00000536218 POLR2MP0CAP2 368 aa15.05■□□□□ -0
LIG1-203ENST00000536218 ALADP13716 330 aa15.05■□□□□ -0
LIG1-203ENST00000536218 CNGA1P29973 690 aa15.05■□□□□ -0
LIG1-203ENST00000536218 ARSHQ5FYA8 562 aa15.05■□□□□ -0
LIG1-203ENST00000536218 RETREG2Q8NC44 543 aa15.05■□□□□ -0
LIG1-203ENST00000536218 ERMNQ8TAM6 284 aa15.05■□□□□ -0
LIG1-203ENST00000536218 CRYGNQ8WXF5 182 aa15.05■□□□□ -0
LIG1-203ENST00000536218 BHMT2Q9H2M3 363 aa15.05■□□□□ -0
LIG1-203ENST00000536218 ZBTB39O15060 712 aa15.04■□□□□ -0
LIG1-203ENST00000536218 RAD23BP54727 409 aa15.04■□□□□ -0
LIG1-203ENST00000536218 MRPS35P82673 323 aaKnown RBP15.04■□□□□ -0
LIG1-203ENST00000536218 SPIRE1Q08AE8 756 aa15.04■□□□□ -0
LIG1-203ENST00000536218 TBC1D10BQ4KMP7 808 aaPredicted RBP15.04■□□□□ -0
LIG1-203ENST00000536218 AGBL2Q5U5Z8 902 aa15.04■□□□□ -0
LIG1-203ENST00000536218 PRAMEF18Q5VWM3 479 aa15.04■□□□□ -0
LIG1-203ENST00000536218 TPH2Q8IWU9 490 aa15.04■□□□□ -0
LIG1-203ENST00000536218 AGBL3Q8NEM8 1001 aa15.04■□□□□ -0
LIG1-203ENST00000536218 PRMT1Q99873 361 aaKnown RBP15.04■□□□□ -0
LIG1-203ENST00000536218 NEUROG2Q9H2A3 272 aa15.04■□□□□ -0
LIG1-203ENST00000536218 ARHGAP20Q9P2F6 1191 aa15.04■□□□□ -0
LIG1-203ENST00000536218 DDX39AO00148 427 aaKnown RBP15.04■□□□□ -0
LIG1-203ENST00000536218 SPATA31C1P0DKV0 1188 aa15.04■□□□□ -0
LIG1-203ENST00000536218 ITIH4Q14624 930 aa15.04■□□□□ -0
LIG1-203ENST00000536218 VWA3BQ502W6 1294 aa15.04■□□□□ -0
LIG1-203ENST00000536218 LDHDQ86WU2 507 aa15.04■□□□□ -0
LIG1-203ENST00000536218 FZD1Q9UP38 647 aa15.04■□□□□ -0
LIG1-203ENST00000536218 RSPH10B2B2RC85 870 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms