RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 MCF2L2Q86YR7 1114 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 UBL4BQ8N7F7 174 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 OR2W6PQ8NHA6 318 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 AGBL1Q96MI9 1066 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 TIPINQ9BVW5 301 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 CCPG1Q9ULG6 757 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 RTN2O75298 545 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 PPFIA2O75334 1257 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 GZMAP12544 262 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 EIF3BP55884 814 aaKnown RBP17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 TTC31Q49AM3 519 aaPredicted RBP17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 RPS6KC1Q96S38 1066 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 CCT8L2Q96SF2 557 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 FMO2Q99518 471 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 CBWD1Q9BRT8 395 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 HSPBP1Q9NZL4 362 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 CTTNBP2NLQ9P2B4 639 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 FAM107AO95990 144 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 ASNSP08243 561 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 VCAM1P19320 739 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 HPDP32754 393 aaPredicted RBP17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 GCLMP48507 274 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 GHRHRQ02643 423 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 NAA35Q5VZE5 725 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 MICALCLQ6ZW33 695 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 MIGA2Q7L4E1 593 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 HAUS6Q7Z4H7 955 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 NLRP14Q86W24 1093 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 PRPF38AQ8NAV1 312 aaKnown RBP17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 SLC17A8Q8NDX2 589 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 MORC4Q8TE76 937 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 SLC20A1Q8WUM9 679 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 ALG3Q92685 438 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 DPH5Q9H2P9 285 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 AGO4Q9HCK5 861 aaKnown RBP17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 TBC1D22BQ9NU19 505 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 GGA2Q9UJY4 613 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 UBIAD1Q9Y5Z9 338 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 ZNF536O15090 1300 aa17.31■□□□□ 0.36
CHMP1A-202ENST00000535997 TKFCQ3LXA3 575 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 C1orf220Q5T0J3 134 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 PCNX4Q63HM2 1172 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 FAM83AQ86UY5 434 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 ARHGEF19Q8IW93 802 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 ATP8B4Q8TF62 1192 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 TXLNGYQ9BZA5 131 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 MAP3K20Q9NYL2 800 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 COL20A1Q9P218 1284 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 SLC12A6Q9UHW9 1150 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 SYNGAP1Q96PV0 1343 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 TISP43B9A030 160 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 INPP5BP32019 993 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 MAP3K10Q02779 954 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 ODF2Q5BJF6 829 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 YTHDF3Q7Z739 585 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 PACS2Q86VP3 889 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 FAM71AQ8IYT1 594 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 RPUSD2Q8IZ73 545 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 C3orf20Q8ND61 904 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 ZNF473Q8WTR7 871 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 CLEC4DQ8WXI8 215 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 GLIS2Q9BZE0 524 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 TMEM39BQ9GZU3 492 aa17.3■□□□□ 0.36
CHMP1A-202ENST00000535997 C21orf2O43822 256 aa17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 YWHABP31946 246 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 MICALL1Q8N3F8 863 aa17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 MYCBPAPQ8TBZ2 947 aa17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 TRIM51Q9BSJ1 452 aa17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 VEZTQ9HBM0 779 aa17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 ZDHHC18Q9NUE0 388 aa17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 PKD2L1Q9P0L9 805 aa17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 RASAL2Q9UJF2 1139 aa17.29■□□□□ 0.36
CHMP1A-202ENST00000535997 NFIBO00712 420 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 MEFVO15553 781 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 RAD17O75943 681 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 MTA2O94776 668 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 GGPS1O95749 300 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 CHRNA3P32297 505 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 SEC24CP53992 1094 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 PPP2R2AP63151 447 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 ZNF211Q13398 564 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 MTMR1Q13613 665 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 C4orf19Q8IY42 314 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 GLG1Q92896 1179 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 TRIM31Q9BZY9 425 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 TMEM117Q9H0C3 514 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 ERVK-5Q9HDB9 667 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 BCCIPQ9P287 314 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 PODXLO00592 558 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 GBP1P32455 592 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 MXI1P50539 228 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 ADAT2Q7Z6V5 191 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 SAMD3Q8N6K7 520 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 ZSWIM1Q9BR11 485 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 EFCC1Q9HA90 598 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 TMOD4Q9NZQ9 345 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms