RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 PRPF6O94906 941 aaKnown RBP17.12■□□□□ 0.33
CNN1-202ENST00000535659 PRKCBP05771 671 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 BMP6P22004 513 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 RFC2P35250 354 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 NFX1Q12986 1120 aaKnown RBP17.12■□□□□ 0.33
CNN1-202ENST00000535659 TSHZ1Q6ZSZ6 1077 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 FAM228AQ86W67 206 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 SCFD1Q8WVM8 642 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 HVCN1Q96D96 273 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 PRIMPOLQ96LW4 560 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 ACCSQ96QU6 501 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 MYH11P35749 1972 aa17.12■□□□□ 0.33
CNN1-202ENST00000535659 ERLIN2O94905 339 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 CD52P31358 61 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 KCNA1Q09470 495 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 PRPF4BQ13523 1007 aaKnown RBP17.11■□□□□ 0.33
CNN1-202ENST00000535659 AMHR2Q16671 573 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 L1TD1Q5T7N2 865 aaKnown RBP17.11■□□□□ 0.33
CNN1-202ENST00000535659 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 MYOCDQ8IZQ8 938 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 TMEM206Q9H813 350 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 MAPK8IP1Q9UQF2 711 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 RBAK-RBAKDNI3L0D1 243 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 KIF20AO95235 890 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 CXCL10P02778 98 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 CSF2RAP15509 400 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 SYN1P17600 705 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 AXLP30530 894 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 PAK2Q13177 524 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 BMT2Q1RMZ1 405 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 COBLL1Q53SF7 1204 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 FAM43BQ6ZT52 329 aaPredicted RBP17.11■□□□□ 0.33
CNN1-202ENST00000535659 DEFB128Q7Z7B8 93 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 MAP4K3Q8IVH8 894 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 SMYD4Q8IYR2 804 aaPredicted RBP17.11■□□□□ 0.33
CNN1-202ENST00000535659 RPUSD2Q8IZ73 545 aaKnown RBP17.11■□□□□ 0.33
CNN1-202ENST00000535659 GUF1Q8N442 669 aaKnown RBP17.11■□□□□ 0.33
CNN1-202ENST00000535659 BADQ92934 168 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 MRPL4Q9BYD3 311 aaKnown RBP17.11■□□□□ 0.33
CNN1-202ENST00000535659 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
CNN1-202ENST00000535659 ERVK-5Q9HDB9 667 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 EXOC7Q9UPT5 735 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 USP20Q9Y2K6 914 aa17.11■□□□□ 0.33
CNN1-202ENST00000535659 B4GALT5O43286 388 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 TSPAN1O60635 241 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 EDN1P05305 212 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 HOXD13P35453 343 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 PRCPP42785 496 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 NLRP12P59046 1061 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 KNOP1Q1ED39 458 aaKnown RBP17.1■□□□□ 0.33
CNN1-202ENST00000535659 PLEKHG4Q58EX7 1191 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 HABP4Q5JVS0 413 aaKnown RBP17.1■□□□□ 0.33
CNN1-202ENST00000535659 ZPBP2Q6X784 338 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 SYCP3Q8IZU3 236 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 DBF4BQ8NFT6 615 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 SEPT8Q92599 483 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 ACO2Q99798 780 aaKnown RBP17.1■□□□□ 0.33
CNN1-202ENST00000535659 CHST12Q9NRB3 414 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 ZMYND8Q9ULU4 1186 aaPredicted RBP17.1■□□□□ 0.33
CNN1-202ENST00000535659 SIP14410 1827 aa17.1■□□□□ 0.33
CNN1-202ENST00000535659 A0A1B0GUA9 196 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 TTLL13PA6NNM8 815 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 PPP1R3GB7ZBB8 358 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 ARF4P18085 180 aaPredicted RBP17.09■□□□□ 0.33
CNN1-202ENST00000535659 HOXA11P31270 313 aaPredicted RBP17.09■□□□□ 0.33
CNN1-202ENST00000535659 PPP1R2P41236 205 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 NELFCDQ8IXH7 590 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 ADSSL1Q8N142 457 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 MLKLQ8NB16 471 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 BICD1Q96G01 975 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 TARS2Q9BW92 718 aaKnown RBP17.09■□□□□ 0.33
CNN1-202ENST00000535659 AGPAT5Q9NUQ2 364 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 UBE4BO95155 1302 aa17.09■□□□□ 0.33
CNN1-202ENST00000535659 TANC1Q9C0D5 1861 aa17.08■□□□□ 0.33
CNN1-202ENST00000535659 PIGRP01833 764 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
CNN1-202ENST00000535659 ZSCAN20P17040 1043 aaPredicted RBP17.08■□□□□ 0.32
CNN1-202ENST00000535659 STIM1Q13586 685 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 TMEM132AQ24JP5 1023 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 ZSCAN23Q3MJ62 389 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 ATF7IP2Q5U623 682 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 APBB2Q92870 758 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 VWCEQ96DN2 955 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 CPB2Q96IY4 423 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 LBHD1Q9BQE6 289 aaPredicted RBP17.08■□□□□ 0.32
CNN1-202ENST00000535659 TMX1Q9H3N1 280 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 IL23AQ9NPF7 189 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 PIN4Q9Y237 131 aaKnown RBP17.08■□□□□ 0.32
CNN1-202ENST00000535659 TNFSF13BQ9Y275 285 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 CNTNAP2Q9UHC6 1331 aa17.08■□□□□ 0.32
CNN1-202ENST00000535659 SYCE3A1L190 88 aa17.07■□□□□ 0.32
CNN1-202ENST00000535659 ANKRD63C9JTQ0 380 aa17.07■□□□□ 0.32
CNN1-202ENST00000535659 HNRNPDLO14979 420 aaKnown RBP17.07■□□□□ 0.32
CNN1-202ENST00000535659 PFKMP08237 780 aa17.07■□□□□ 0.32
CNN1-202ENST00000535659 LIG4P49917 911 aa17.07■□□□□ 0.32
CNN1-202ENST00000535659 FPGSQ05932 587 aa17.07■□□□□ 0.32
CNN1-202ENST00000535659 PPIGQ13427 754 aaKnown RBP eCLIP17.07■□□□□ 0.32
CNN1-202ENST00000535659 NOTUMQ6P988 496 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms